Cow genome map


           Conread name:
           Ss1.1-rpfco0139_p3.5
        

               Conread position:
               99-427
               

               Cow position:
               chr13:39411516-39411860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               69, 15
               

               Conread position:
               102-297
               

               Cow position:
               chr13:56024058-56023870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               129, 8
               

               Conread position:
               118-283
               

               Cow position:
               chr13:61084561-61084394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               123-279
               

               Cow position:
               chr13:21603354-21603198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               143, 104
               

               Conread position:
               133-297
               

               Cow position:
               chr13:33564330-33564498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               85, 159
               

               Conread position:
               133-299
               

               Cow position:
               chr13:19128008-19128176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               94, 163
               

               Conread position:
               133-372
               

               Cow position:
               chr13:54106683-54106435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               89, 165
               
Show alignments to all cow chromosomes.