Cow genome map


           Conread name:
           Ss1.1-rpfco0139_p3.5
        

               Conread position:
               86-434
               

               Cow position:
               chr15:1850943-1851295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               142, 28
               

               Conread position:
               101-305
               

               Cow position:
               chr15:5641841-5642048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               126, 88
               

               Conread position:
               114-296
               

               Cow position:
               chr15:12021918-12021733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               118, 75
               

               Conread position:
               115-297
               

               Cow position:
               chr15:4387279-4387093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               113, 179
               

               Conread position:
               133-283
               

               Cow position:
               chr15:26408476-26408630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               65, 79
               

               Conread position:
               133-299
               

               Cow position:
               chr15:35844498-35844330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               133-308
               

               Cow position:
               chr15:52592081-52591905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               97, 158
               

               Conread position:
               133-373
               

               Cow position:
               chr15:37459388-37459134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               68, 90
               

               Conread position:
               184-438
               

               Cow position:
               chr15:38637325-38637058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               32, 107
               
Show alignments to all cow chromosomes.