Cow genome map


           Conread name:
           Ss1.1-rpfco0139_p3.5
        

               Conread position:
               94-415
               

               Cow position:
               chr20:12687004-12687342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               38, 159
               

               Conread position:
               117-297
               

               Cow position:
               chr20:25848907-25849088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               111, 170
               

               Conread position:
               118-297
               

               Cow position:
               chr20:21916562-21916379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               111, 172
               

               Conread position:
               122-275
               

               Cow position:
               chr20:33062262-33062419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               133-297
               

               Cow position:
               chr20:37582075-37581907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               68, 90
               

               Conread position:
               133-302
               

               Cow position:
               chr20:5792192-5792020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               94, 161
               

               Conread position:
               138-438
               

               Cow position:
               chr20:9993533-9993242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               93, 49
               
Show alignments to all cow chromosomes.