Cow genome map


           Conread name:
           Ss1.1-rpfco0139_p3.5
        

               Conread position:
               118-297
               

               Cow position:
               chr28:25092909-25093087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               74, 68
               

               Conread position:
               118-298
               

               Cow position:
               chr28:17390314-17390130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               110, 176
               

               Conread position:
               118-373
               

               Cow position:
               chr28:10471563-10471297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               111, 223
               

               Conread position:
               118-434
               

               Cow position:
               chr28:17665416-17665744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               110, 176
               

               Conread position:
               119-434
               

               Cow position:
               chr28:15034201-15034548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               122-426
               

               Cow position:
               chr28:29841716-29842017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               207
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               22, 47
               

               Conread position:
               134-297
               

               Cow position:
               chr28:27957823-27957990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               93, 160
               
Show alignments to all cow chromosomes.