Cow genome map
| Conread name: | Ss1.1-rpfco0139_p3.5 |
| Conread position: | 9-480 |
| Cow position: | chr3:67518524-67519019 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 61 |
| Conread position: | 88-283 |
| Cow position: | chr3:56399065-56398869 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 139, 45 |
| Conread position: | 91-307 |
| Cow position: | chr3:73530302-73530088 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 137, 24 |
| Conread position: | 113-458 |
| Cow position: | chr3:12565650-12566005 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 11, 71 |
| Conread position: | 118-297 |
| Cow position: | chr3:595917-595734 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 100, 88 |
| Conread position: | 118-297 |
| Cow position: | chr3:30316338-30316154 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 118-297 |
| Cow position: | chr3:46504340-46504157 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 111, 172 |
| Conread position: | 121-334 |
| Cow position: | chr3:2709082-2709302 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 107, 173 |
| Conread position: | 123-297 |
| Cow position: | chr3:43191506-43191684 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 105, 171 |
| Conread position: | 123-438 |
| Cow position: | chr3:65919170-65918848 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 104, 83 |
| Conread position: | 124-296 |
| Cow position: | chr3:58167457-58167284 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 104, 167 |
| Conread position: | 129-435 |
| Cow position: | chr3:19806580-19806268 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 208 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 99, 162 |
| Conread position: | 133-298 |
| Cow position: | chr3:4736156-4736318 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 133-299 |
| Cow position: | chr3:69436684-69436853 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 94, 49 |
| Conread position: | 133-434 |
| Cow position: | chr3:27920182-27919870 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 96, 204 |
| Conread position: | 134-296 |
| Cow position: | chr3:22852748-22852912 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 158 |
Show alignments to all cow chromosomes.