Cow genome map


           Conread name:
           Ss1.1-rpgl22_k5.5
        

               Conread position:
               3-237
               

               Cow position:
               chr6:11449853-11450078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               3-271
               

               Cow position:
               chr6:38260370-38260641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 63
               

               Conread position:
               4-313
               

               Cow position:
               chr6:32132934-32132615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               113, 54
               

               Conread position:
               10-169
               

               Cow position:
               chr6:41636633-41636790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               17-333
               

               Cow position:
               chr6:44643564-44643262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               227
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               203, 26
               

               Conread position:
               43-202
               

               Cow position:
               chr6:42045847-42045693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               65-374
               

               Cow position:
               chr6:33398462-33398768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               189, 43
               

               Conread position:
               134-513
               

               Cow position:
               chr6:62314627-62314232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               23, 72
               

               Conread position:
               277-524
               

               Cow position:
               chr6:38260946-38261192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               58, 25
               

               Conread position:
               283-526
               

               Cow position:
               chr6:39423261-39423490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               119, 56
               
Show alignments to all cow chromosomes.