Cow genome map


           Conread name:
           Ss1.1-rpigcf0_021389.5
        

               Conread position:
               1-210
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               162, 106
               

               Conread position:
               1-213
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               166
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               1-224
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               64, 48
               

               Conread position:
               1-290
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               161, 34
               

               Conread position:
               1-423
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 11
               

               Conread position:
               1-468
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 129
               

               Conread position:
               1-472
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               302
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               114, 81
               

               Conread position:
               1-477
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 102
               

               Conread position:
               1-487
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 126
               

               Conread position:
               1-487
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 129
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 100
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 124
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 100
               

               Conread position:
               1-491
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 110
               

               Conread position:
               2-242
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               160, 10
               

               Conread position:
               2-259
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               157, 10
               

               Conread position:
               2-444
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 18
               

               Conread position:
               2-486
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 10
               

               Conread position:
               2-486
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 10
               

               Conread position:
               3-201
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               159, 6
               

               Conread position:
               4-489
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               333
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               5, 9
               

               Conread position:
               6-485
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 123
               

               Conread position:
               7-456
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 5
               

               Conread position:
               7-465
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               306
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               152, 5
               

               Conread position:
               7-486
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 122
               

               Conread position:
               7-489
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 5
               

               Conread position:
               8-150
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               8-220
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               8-266
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               116, 105
               

               Conread position:
               8-301
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               154, 59
               

               Conread position:
               8-317
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 112
               

               Conread position:
               8-317
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 115
               

               Conread position:
               8-429
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 122
               

               Conread position:
               8-455
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               302
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               182, 87
               

               Conread position:
               8-456
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               311
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               84, 211
               

               Conread position:
               8-457
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 122
               

               Conread position:
               8-463
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-466
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 83
               

               Conread position:
               8-466
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-466
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 88
               

               Conread position:
               8-466
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 123
               

               Conread position:
               8-473
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 27
               

               Conread position:
               8-477
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-477
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 85
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 121
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 17
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 121
               

               Conread position:
               8-487
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 122
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               333
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               157, 102
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 115
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 118
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 115
               

               Conread position:
               8-492
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 87
               

               Conread position:
               8-492
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 99
               

               Conread position:
               8-492
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 105
               

               Conread position:
               8-492
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 41
               

               Conread position:
               9-468
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               316, 94
               

               Conread position:
               9-492
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 75
               

               Conread position:
               10-492
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 13
               

               Conread position:
               12-252
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               183
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               38, 118
               

               Conread position:
               12-468
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               306
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               216, 13
               

               Conread position:
               12-468
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               12-474
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 117
               

               Conread position:
               12-476
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               301
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               150, 75
               

               Conread position:
               12-488
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 118
               

               Conread position:
               12-489
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 81
               

               Conread position:
               13-225
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               150, 77
               

               Conread position:
               13-474
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 15
               

               Conread position:
               15-492
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 101
               

               Conread position:
               17-225
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               148, 106
               

               Conread position:
               23-486
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 106
               

               Conread position:
               24-474
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 35
               

               Conread position:
               26-418
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 80
               

               Conread position:
               26-489
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 98
               

               Conread position:
               36-486
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               324
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               98, 189
               

               Conread position:
               36-491
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               318
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               129, 59
               

               Conread position:
               58-484
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               277
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               99, 66
               

               Conread position:
               59-489
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 67
               

               Conread position:
               67-485
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 19
               

               Conread position:
               71-489
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               296
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               36, 55
               

               Conread position:
               77-317
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               106-486
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               271
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               56, 24
               

               Conread position:
               151-456
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 0
               

               Conread position:
               188-460
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 40
               

               Conread position:
               200-489
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               28, 13
               

               Conread position:
               204-464
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               13, 25
               

               Conread position:
               224-468
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               188, 0
               

               Conread position:
               241-423
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               61, 172
               

               Conread position:
               256-492
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               118, 159
               

               Conread position:
               262-470
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               268-470
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               54, 9
               

               Conread position:
               276-492
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               295-488
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               89, 29
               

               Conread position:
               295-492
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 49
               

               Conread position:
               304-477
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               152, 111
               

               Conread position:
               304-489
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               304-492
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               108, 0
               
Show alignments to all cow chromosomes.