Cow genome map


           Conread name:
           Ss1.1-rpigcf0_021389.5
        

               Conread position:
               1-210
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               111, 121
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               86, 127
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               162, 88
               

               Conread position:
               1-224
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               162, 126
               

               Conread position:
               1-453
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               289
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               158, 110
               

               Conread position:
               1-473
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               314
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               93, 72
               

               Conread position:
               1-487
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               336
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               12, 120
               

               Conread position:
               1-492
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 85
               

               Conread position:
               1-492
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 110
               

               Conread position:
               2-172
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               161, 8
               

               Conread position:
               2-423
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               305
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               105, 8
               

               Conread position:
               2-455
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 10
               

               Conread position:
               2-474
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 14
               

               Conread position:
               2-474
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               312
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               7, 89
               

               Conread position:
               2-492
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 10
               

               Conread position:
               7-210
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               155, 93
               

               Conread position:
               7-489
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 116
               

               Conread position:
               8-317
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               220
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               179, 117
               

               Conread position:
               8-423
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               285
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               166, 17
               

               Conread position:
               8-459
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               287
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               65, 79
               

               Conread position:
               8-466
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 123
               

               Conread position:
               8-479
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 111
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 123
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 118
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 101
               

               Conread position:
               12-487
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 6
               

               Conread position:
               12-492
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 111
               

               Conread position:
               13-329
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 90
               

               Conread position:
               15-477
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 114
               

               Conread position:
               15-486
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 114
               

               Conread position:
               18-226
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               140, 109
               

               Conread position:
               38-478
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               307
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               127, 87
               

               Conread position:
               47-489
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               312
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               73, 50
               

               Conread position:
               160-394
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               47, 102
               

               Conread position:
               170-486
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               14, 46
               

               Conread position:
               177-492
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               183-489
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               68, 29
               

               Conread position:
               196-466
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               5, 19
               

               Conread position:
               200-475
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               22, 12
               

               Conread position:
               209-489
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               189, 19
               

               Conread position:
               239-473
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               166, 0
               

               Conread position:
               244-468
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               245-423
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               52, 44
               

               Conread position:
               256-461
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               41, 33
               

               Conread position:
               304-457
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               80, 74
               

               Conread position:
               306-468
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               317-474
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               17, 0
               
Show alignments to all cow chromosomes.