Cow genome map


           Conread name:
           Ss1.1-rpigcf0_021389.5
        

               Conread position:
               1-204
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               164, 122
               

               Conread position:
               1-397
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               285, 115
               

               Conread position:
               1-423
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 95
               

               Conread position:
               1-429
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 86
               

               Conread position:
               1-468
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               1-470
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 90
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 113
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 126
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 126
               

               Conread position:
               1-492
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 95
               

               Conread position:
               1-492
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 134
               

               Conread position:
               2-217
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               160, 88
               

               Conread position:
               2-250
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               195
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               74, 95
               

               Conread position:
               2-466
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 14
               

               Conread position:
               2-468
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 87
               

               Conread position:
               2-470
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 108
               

               Conread position:
               2-471
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 130
               

               Conread position:
               2-492
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 125
               

               Conread position:
               4-486
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 88
               

               Conread position:
               7-317
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 88
               

               Conread position:
               8-367
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-405
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 11
               

               Conread position:
               8-456
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               292
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               155, 99
               

               Conread position:
               8-464
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 121
               

               Conread position:
               8-464
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 130
               

               Conread position:
               8-466
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 114
               

               Conread position:
               8-466
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 99
               

               Conread position:
               8-468
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 105
               

               Conread position:
               8-476
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 120
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 35
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 121
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 121
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 115
               

               Conread position:
               8-492
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 56
               

               Conread position:
               8-492
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-492
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-492
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 67
               

               Conread position:
               8-492
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 98
               

               Conread position:
               12-423
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               12-468
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 117
               

               Conread position:
               12-489
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 197
               

               Conread position:
               12-489
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 112
               

               Conread position:
               15-489
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               325
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               150, 91
               

               Conread position:
               15-489
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 80
               

               Conread position:
               15-489
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 111
               

               Conread position:
               22-226
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               140, 68
               

               Conread position:
               25-253
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               133, 84
               

               Conread position:
               49-492
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               168, 80
               

               Conread position:
               65-489
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               291
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               100, 65
               

               Conread position:
               78-489
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               281
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               87, 52
               

               Conread position:
               104-457
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               60, 11
               

               Conread position:
               131-489
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               34, 83
               

               Conread position:
               142-476
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               22, 71
               

               Conread position:
               230-468
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               251-487
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               70, 33
               

               Conread position:
               286-461
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               10, 91
               

               Conread position:
               304-487
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               108, 0
               
Show alignments to all cow chromosomes.