Cow genome map
Conread name: | Ss1.1-rpigcf0_021389.5 |
Conread position: | 1-162 |
Cow position: | chr14:44422009-44421850 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 123 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 6, 12 |
Conread position: | 1-199 |
Cow position: | chr14:7831088-7831280 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 148 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 1-210 |
Cow position: | chr14:44855973-44856182 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 153 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 156, 126 |
Conread position: | 1-224 |
Cow position: | chr14:34775047-34774832 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 156 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 161, 89 |
Conread position: | 1-224 |
Cow position: | chr14:47624021-47623801 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 165 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 157, 99 |
Conread position: | 1-255 |
Cow position: | chr14:43552872-43552621 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 174 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 6, 12 |
Conread position: | 1-275 |
Cow position: | chr14:14309612-14309880 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 194 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 114, 126 |
Conread position: | 1-371 |
Cow position: | chr14:22018856-22018478 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 11 |
Conread position: | 1-372 |
Cow position: | chr14:36967711-36967363 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 260 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 99, 127 |
Conread position: | 1-453 |
Cow position: | chr14:23690772-23691205 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 128 |
Conread position: | 1-460 |
Cow position: | chr14:35387678-35388128 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 137 |
Conread position: | 1-466 |
Cow position: | chr14:45833617-45833162 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 136 |
Conread position: | 1-468 |
Cow position: | chr14:41085356-41085783 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 162, 40 |
Conread position: | 1-474 |
Cow position: | chr14:44780463-44780921 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 313 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 6, 70 |
Conread position: | 1-474 |
Cow position: | chr14:44782803-44783261 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 313 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 6, 70 |
Conread position: | 1-475 |
Cow position: | chr14:11468051-11467600 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 113 |
Conread position: | 1-477 |
Cow position: | chr14:22032230-22032690 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 128 |
Conread position: | 1-489 |
Cow position: | chr14:13660535-13660992 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 331 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 98, 131 |
Conread position: | 1-490 |
Cow position: | chr14:45916852-45916348 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 79 |
Conread position: | 1-492 |
Cow position: | chr14:13272710-13272226 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 162, 42 |
Conread position: | 1-492 |
Cow position: | chr14:40339163-40338668 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 129 |
Conread position: | 1-492 |
Cow position: | chr14:44376888-44376400 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 96 |
Conread position: | 2-252 |
Cow position: | chr14:44261639-44261890 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 178 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 5, 113 |
Conread position: | 2-285 |
Cow position: | chr14:40170221-40170509 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 204 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 10, 73 |
Conread position: | 2-486 |
Cow position: | chr14:50110030-50109566 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 8 |
Conread position: | 2-492 |
Cow position: | chr14:44225864-44225376 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 352, 21 |
Conread position: | 3-476 |
Cow position: | chr14:44580395-44579941 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 120 |
Conread position: | 4-226 |
Cow position: | chr14:29048448-29048666 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 164 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 9, 92 |
Conread position: | 4-317 |
Cow position: | chr14:45205523-45205199 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 215 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 9, 97 |
Conread position: | 6-486 |
Cow position: | chr14:5528513-5528041 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 10 |
Conread position: | 7-454 |
Cow position: | chr14:19328821-19329255 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 5 |
Conread position: | 7-480 |
Cow position: | chr14:45160311-45159828 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 123 |
Conread position: | 7-492 |
Cow position: | chr14:17684841-17684373 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 46 |
Conread position: | 7-492 |
Cow position: | chr14:30596923-30597434 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 337 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 157, 23 |
Conread position: | 8-198 |
Cow position: | chr14:13778309-13778119 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 143 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 151, 121 |
Conread position: | 8-198 |
Cow position: | chr14:16920237-16920427 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 143 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 151, 121 |
Conread position: | 8-225 |
Cow position: | chr14:9045010-9044794 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 158 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 157, 121 |
Conread position: | 8-260 |
Cow position: | chr14:45079979-45079733 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 173 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 118, 79 |
Conread position: | 8-275 |
Cow position: | chr14:46669767-46669505 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 186 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 150, 45 |
Conread position: | 8-317 |
Cow position: | chr14:750014-749712 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 220 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 157, 99 |
Conread position: | 8-441 |
Cow position: | chr14:14422565-14422978 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 293 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 85, 23 |
Conread position: | 8-452 |
Cow position: | chr14:37223347-37222915 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 121 |
Conread position: | 8-454 |
Cow position: | chr14:20781901-20781470 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 88 |
Conread position: | 8-464 |
Cow position: | chr14:7471821-7471377 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 121 |
Conread position: | 8-479 |
Cow position: | chr14:44551500-44551034 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 120 |
Conread position: | 8-485 |
Cow position: | chr14:46464236-46463777 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 98 |
Conread position: | 8-486 |
Cow position: | chr14:11154708-11155178 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 121 |
Conread position: | 8-486 |
Cow position: | chr14:13302476-13302005 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 121 |
Conread position: | 8-486 |
Cow position: | chr14:17001610-17002076 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 121 |
Conread position: | 8-486 |
Cow position: | chr14:28994410-28994884 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 121 |
Conread position: | 8-486 |
Cow position: | chr14:44685493-44685012 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 122 |
Conread position: | 8-488 |
Cow position: | chr14:46084070-46083605 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 68 |
Conread position: | 8-489 |
Cow position: | chr14:17492012-17492508 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 96 |
Conread position: | 8-489 |
Cow position: | chr14:30585491-30585993 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 115 |
Conread position: | 8-489 |
Cow position: | chr14:45672600-45673100 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 108 |
Conread position: | 8-489 |
Cow position: | chr14:45712530-45712978 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 331 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 69, 116 |
Conread position: | 8-492 |
Cow position: | chr14:45767451-45767004 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 323 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 79, 109 |
Conread position: | 9-376 |
Cow position: | chr14:38532854-38533218 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 47 |
Conread position: | 9-460 |
Cow position: | chr14:31607474-31607901 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 306 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 106, 206 |
Conread position: | 9-484 |
Cow position: | chr14:15277407-15277851 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 322 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 180, 87 |
Conread position: | 10-413 |
Cow position: | chr14:33235445-33235046 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 252 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 105, 6 |
Conread position: | 12-217 |
Cow position: | chr14:45850669-45850465 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 154 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 151, 101 |
Conread position: | 12-463 |
Cow position: | chr14:48254871-48255310 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 13 |
Conread position: | 12-486 |
Cow position: | chr14:16273855-16274324 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 118 |
Conread position: | 12-489 |
Cow position: | chr14:44130368-44129930 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 328 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 118, 85 |
Conread position: | 14-224 |
Cow position: | chr14:1500193-1499983 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 160 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 26, 114 |
Conread position: | 14-492 |
Cow position: | chr14:50134349-50133888 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 34 |
Conread position: | 15-253 |
Cow position: | chr14:23256799-23256556 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 179 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 94, 195 |
Conread position: | 17-489 |
Cow position: | chr14:2283424-2282939 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 106 |
Conread position: | 35-489 |
Cow position: | chr14:17241653-17241184 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 311 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 130, 70 |
Conread position: | 37-466 |
Cow position: | chr14:41755289-41754871 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 28 |
Conread position: | 78-487 |
Cow position: | chr14:33394428-33394858 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 284 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 87, 52 |
Conread position: | 79-487 |
Cow position: | chr14:10562006-10561577 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 284 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 86, 54 |
Conread position: | 103-472 |
Cow position: | chr14:41407210-41406831 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 262 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 60, 17 |
Conread position: | 129-489 |
Cow position: | chr14:9044782-9044426 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 223 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 98, 71 |
Conread position: | 165-464 |
Cow position: | chr14:5511479-5511190 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 208 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 6, 51 |
Conread position: | 172-423 |
Cow position: | chr14:42404187-42403938 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 174 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 66, 49 |
Conread position: | 200-485 |
Cow position: | chr14:45304374-45304652 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 207-489 |
Cow position: | chr14:16418311-16418595 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 198 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 20, 176 |
Conread position: | 237-469 |
Cow position: | chr14:16920519-16920738 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 164 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 241-453 |
Cow position: | chr14:44856187-44856398 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 152 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 77, 12 |
Conread position: | 245-489 |
Cow position: | chr14:47623807-47623576 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 172 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 304-489 |
Cow position: | chr14:29049249-29049433 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 134 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 331-488 |
Cow position: | chr14:46434329-46434173 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 119 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 53, 46 |
Show alignments to all cow chromosomes.