Cow genome map

Conread name: Ss1.1-rpigcf0_021389.5

Conread position: 1-204
Cow position:
Alignm length: 205
Alignm identity: 150
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 162, 17

Conread position: 1-210
Cow position:
Alignm length: 213
Alignm identity: 164
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 123, 105

Conread position: 1-210
Cow position:
Alignm length: 212
Alignm identity: 152
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 162, 113

Conread position: 1-226
Cow position:
Alignm length: 228
Alignm identity: 169
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 9, 129

Conread position: 1-275
Cow position:
Alignm length: 281
Alignm identity: 184
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 100, 88

Conread position: 1-348
Cow position:
Alignm length: 350
Alignm identity: 239
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 226, 92

Conread position: 1-360
Cow position:
Alignm length: 367
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 126

Conread position: 1-399
Cow position:
Alignm length: 400
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 120

Conread position: 1-422
Cow position:
Alignm length: 424
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 96

Conread position: 1-454
Cow position:
Alignm length: 457
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 79

Conread position: 1-456
Cow position:
Alignm length: 481
Alignm identity: 319
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 79, 27

Conread position: 1-459
Cow position:
Alignm length: 463
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 109

Conread position: 1-460
Cow position:
Alignm length: 469
Alignm identity: 294
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 87, 155

Conread position: 1-468
Cow position:
Alignm length: 473
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 124

Conread position: 1-470
Cow position:
Alignm length: 475
Alignm identity: 309
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 226, 31

Conread position: 1-472
Cow position:
Alignm length: 486
Alignm identity: 322
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 105, 198

Conread position: 1-475
Cow position:
Alignm length: 476
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 139

Conread position: 1-480
Cow position:
Alignm length: 492
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 42

Conread position: 1-486
Cow position:
Alignm length: 495
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 11

Conread position: 1-487
Cow position:
Alignm length: 490
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 108

Conread position: 1-488
Cow position:
Alignm length: 504
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 106

Conread position: 1-488
Cow position:
Alignm length: 490
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 114

Conread position: 1-489
Cow position:
Alignm length: 514
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 100

Conread position: 1-490
Cow position:
Alignm length: 496
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 84

Conread position: 1-491
Cow position:
Alignm length: 516
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 128

Conread position: 1-492
Cow position:
Alignm length: 517
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 94

Conread position: 1-492
Cow position:
Alignm length: 493
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 52

Conread position: 1-492
Cow position:
Alignm length: 494
Alignm identity: 316
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 159, 44

Conread position: 1-492
Cow position:
Alignm length: 504
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 127

Conread position: 2-199
Cow position:
Alignm length: 199
Alignm identity: 148
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 157, 10

Conread position: 2-210
Cow position:
Alignm length: 215
Alignm identity: 159
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 86, 112

Conread position: 2-210
Cow position:
Alignm length: 213
Alignm identity: 153
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 104, 128

Conread position: 2-348
Cow position:
Alignm length: 350
Alignm identity: 240
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 14, 107

Conread position: 2-456
Cow position:
Alignm length: 459
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 17

Conread position: 2-460
Cow position:
Alignm length: 464
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 129

Conread position: 2-466
Cow position:
Alignm length: 468
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 10

Conread position: 2-468
Cow position:
Alignm length: 468
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 17

Conread position: 2-469
Cow position:
Alignm length: 469
Alignm identity: 299
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 290, 11

Conread position: 2-486
Cow position:
Alignm length: 487
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 10

Conread position: 2-492
Cow position:
Alignm length: 494
Alignm identity: 298
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 10, 74

Conread position: 2-492
Cow position:
Alignm length: 494
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 10

Conread position: 3-481
Cow position:
Alignm length: 481
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 107

Conread position: 4-466
Cow position:
Alignm length: 467
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 126

Conread position: 4-466
Cow position:
Alignm length: 466
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 125

Conread position: 4-489
Cow position:
Alignm length: 511
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 103

Conread position: 5-488
Cow position:
Alignm length: 510
Alignm identity: 337
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 8, 92

Conread position: 6-399
Cow position:
Alignm length: 397
Alignm identity: 269
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 157, 6

Conread position: 6-423
Cow position:
Alignm length: 420
Alignm identity: 278
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 157, 19

Conread position: 6-474
Cow position:
Alignm length: 473
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 14

Conread position: 7-226
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 108, 16

Conread position: 7-380
Cow position:
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 86

Conread position: 7-452
Cow position:
Alignm length: 453
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 5

Conread position: 7-464
Cow position:
Alignm length: 460
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 28

Conread position: 7-466
Cow position:
Alignm length: 471
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 122

Conread position: 7-489
Cow position:
Alignm length: 485
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 115

Conread position: 8-211
Cow position:
Alignm length: 205
Alignm identity: 153
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 154, 103

Conread position: 8-224
Cow position:
Alignm length: 220
Alignm identity: 152
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 79, 116

Conread position: 8-253
Cow position:
Alignm length: 247
Alignm identity: 171
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 157, 115

Conread position: 8-258
Cow position:
Alignm length: 254
Alignm identity: 176
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 157, 98

Conread position: 8-260
Cow position:
Alignm length: 258
Alignm identity: 181
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 131, 85

Conread position: 8-266
Cow position:
Alignm length: 264
Alignm identity: 185
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 157, 115

Conread position: 8-274
Cow position:
Alignm length: 270
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 123

Conread position: 8-296
Cow position:
Alignm length: 301
Alignm identity: 208
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 79, 10

Conread position: 8-317
Cow position:
Alignm length: 313
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 155, 121

Conread position: 8-365
Cow position:
Alignm length: 362
Alignm identity: 255
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 154, 41

Conread position: 8-394
Cow position:
Alignm length: 388
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-423
Cow position:
Alignm length: 439
Alignm identity: 308
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 221, 17

Conread position: 8-427
Cow position:
Alignm length: 423
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 120

Conread position: 8-454
Cow position:
Alignm length: 453
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-458
Cow position:
Alignm length: 455
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 114

Conread position: 8-460
Cow position:
Alignm length: 473
Alignm identity: 319
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 104, 67

Conread position: 8-466
Cow position:
Alignm length: 486
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 118

Conread position: 8-476
Cow position:
Alignm length: 471
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 123

Conread position: 8-477
Cow position:
Alignm length: 476
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-486
Cow position:
Alignm length: 488
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 58

Conread position: 8-486
Cow position:
Alignm length: 481
Alignm identity: 323
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 20, 15

Conread position: 8-486
Cow position:
Alignm length: 484
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-486
Cow position:
Alignm length: 487
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 108

Conread position: 8-486
Cow position:
Alignm length: 488
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 124

Conread position: 8-486
Cow position:
Alignm length: 486
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 57

Conread position: 8-486
Cow position:
Alignm length: 486
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 123

Conread position: 8-489
Cow position:
Alignm length: 502
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 117

Conread position: 8-489
Cow position:
Alignm length: 506
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 66

Conread position: 8-489
Cow position:
Alignm length: 507
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 34

Conread position: 8-489
Cow position:
Alignm length: 506
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 85

Conread position: 8-489
Cow position:
Alignm length: 502
Alignm identity: 333
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 219, 101

Conread position: 8-489
Cow position:
Alignm length: 508
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 201

Conread position: 8-489
Cow position:
Alignm length: 508
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 118

Conread position: 8-489
Cow position:
Alignm length: 512
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 205

Conread position: 8-492
Cow position:
Alignm length: 508
Alignm identity: 332
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 219, 100

Conread position: 8-492
Cow position:
Alignm length: 505
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 125

Conread position: 8-492
Cow position:
Alignm length: 502
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 31

Conread position: 8-492
Cow position:
Alignm length: 487
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 99

Conread position: 8-492
Cow position:
Alignm length: 510
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 121

Conread position: 8-492
Cow position:
Alignm length: 509
Alignm identity: 335
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 157, 82

Conread position: 8-492
Cow position:
Alignm length: 523
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 98

Conread position: 8-492
Cow position:
Alignm length: 511
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 82

Conread position: 9-409
Cow position:
Alignm length: 408
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 14

Conread position: 9-471
Cow position:
Alignm length: 470
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 50

Conread position: 9-477
Cow position:
Alignm length: 474
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 120

Conread position: 11-492
Cow position:
Alignm length: 486
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 14

Conread position: 12-466
Cow position:
Alignm length: 459
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 108

Conread position: 12-474
Cow position:
Alignm length: 467
Alignm identity: 303
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 57, 33

Conread position: 12-481
Cow position:
Alignm length: 471
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 117

Conread position: 13-196
Cow position:
Alignm length: 189
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 13-473
Cow position:
Alignm length: 466
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 116

Conread position: 15-210
Cow position:
Alignm length: 197
Alignm identity: 152
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 143, 112

Conread position: 15-477
Cow position:
Alignm length: 467
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 118

Conread position: 15-492
Cow position:
Alignm length: 482
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 85

Conread position: 17-469
Cow position:
Alignm length: 463
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 97

Conread position: 24-217
Cow position:
Alignm length: 195
Alignm identity: 144
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 139, 75

Conread position: 24-246
Cow position:
Alignm length: 225
Alignm identity: 152
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 204, 90

Conread position: 25-460
Cow position:
Alignm length: 446
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 90

Conread position: 41-476
Cow position:
Alignm length: 439
Alignm identity: 292
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 180, 24

Conread position: 49-489
Cow position:
Alignm length: 464
Alignm identity: 305
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 116, 76

Conread position: 64-474
Cow position:
Alignm length: 414
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 66

Conread position: 68-492
Cow position:
Alignm length: 449
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 37

Conread position: 97-489
Cow position:
Alignm length: 417
Alignm identity: 268
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 68, 33

Conread position: 129-470
Cow position:
Alignm length: 347
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 85

Conread position: 131-438
Cow position:
Alignm length: 311
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 26

Conread position: 134-474
Cow position:
Alignm length: 343
Alignm identity: 227
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 30, 65

Conread position: 149-487
Cow position:
Alignm length: 342
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 64

Conread position: 200-486
Cow position:
Alignm length: 294
Alignm identity: 205
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 31, 13

Conread position: 200-492
Cow position:
Alignm length: 296
Alignm identity: 201
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 80, 13

Conread position: 210-486
Cow position:
Alignm length: 283
Alignm identity: 192
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 18

Conread position: 216-468
Cow position:
Alignm length: 253
Alignm identity: 172
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 230-423
Cow position:
Alignm length: 195
Alignm identity: 144
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 154, 148

Conread position: 232-434
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 138, 0

Conread position: 232-441
Cow position:
Alignm length: 212
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 193, 62

Conread position: 265-424
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 147, 0

Conread position: 295-492
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 117, 0

Conread position: 300-492
Cow position:
Alignm length: 193
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 308-492
Cow position:
Alignm length: 186
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 23, 108

Conread position: 309-423
Cow position:
Alignm length: 115
Alignm identity: 91
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 314-492
Cow position:
Alignm length: 179
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 329-488
Cow position:
Alignm length: 160
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 83, 0

Show alignments to all cow chromosomes.