Cow genome map


           Conread name:
           Ss1.1-rpigcf0_021389.5
        

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               161, 88
               

               Conread position:
               1-210
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               162, 44
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               158, 22
               

               Conread position:
               1-355
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               250
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               106, 89
               

               Conread position:
               1-468
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               311
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               12, 58
               

               Conread position:
               1-468
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               314
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               445, 15
               

               Conread position:
               1-470
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               325
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               383, 82
               

               Conread position:
               1-470
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 126
               

               Conread position:
               2-182
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               17, 10
               

               Conread position:
               2-242
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               101, 223
               

               Conread position:
               2-468
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 125
               

               Conread position:
               2-470
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 269
               

               Conread position:
               2-472
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               322
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               91, 284
               

               Conread position:
               2-486
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 10
               

               Conread position:
               4-487
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 127
               

               Conread position:
               6-486
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 39
               

               Conread position:
               7-407
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 120
               

               Conread position:
               7-465
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 122
               

               Conread position:
               7-466
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 5
               

               Conread position:
               7-486
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 112
               

               Conread position:
               7-489
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               342
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               83, 408
               

               Conread position:
               8-157
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               8-225
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               157, 78
               

               Conread position:
               8-266
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               151, 17
               

               Conread position:
               8-283
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               79, 29
               

               Conread position:
               8-317
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 118
               

               Conread position:
               8-433
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 115
               

               Conread position:
               8-454
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-461
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 123
               

               Conread position:
               8-467
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               310
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               157, 86
               

               Conread position:
               8-477
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 102
               

               Conread position:
               8-477
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 124
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 14
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               332
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               108, 212
               

               Conread position:
               8-487
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 101
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               325
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               243, 111
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 115
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 115
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 122
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 118
               

               Conread position:
               8-492
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 102
               

               Conread position:
               8-492
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 45
               

               Conread position:
               8-492
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 115
               

               Conread position:
               12-226
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               114, 60
               

               Conread position:
               12-423
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 61
               

               Conread position:
               12-443
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 70
               

               Conread position:
               12-470
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               307
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               12-484
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 116
               

               Conread position:
               12-489
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 88
               

               Conread position:
               15-317
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               219
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               148, 44
               

               Conread position:
               15-492
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               338
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               41, 102
               

               Conread position:
               16-381
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               267
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               112, 90
               

               Conread position:
               16-474
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               299
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               25-474
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               314
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               138, 83
               

               Conread position:
               32-492
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 91
               

               Conread position:
               64-476
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               285
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               42, 26
               

               Conread position:
               80-313
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               85, 50
               

               Conread position:
               97-489
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               274
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               68, 33
               

               Conread position:
               146-486
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               18, 40
               

               Conread position:
               150-466
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               7, 41
               

               Conread position:
               199-477
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               13, 48
               

               Conread position:
               230-468
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               182, 0
               

               Conread position:
               241-470
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               244-453
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               277-489
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               295-492
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               181, 73
               

               Conread position:
               300-492
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               300-492
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               84, 17
               

               Conread position:
               304-492
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               14, 59
               

               Conread position:
               308-486
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               164, 12
               
Show alignments to all cow chromosomes.