Cow genome map


           Conread name:
           Ss1.1-rpigcf0_021389.5
        

               Conread position:
               1-210
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               162, 28
               

               Conread position:
               1-210
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               114, 126
               

               Conread position:
               1-210
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               15, 106
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               113, 99
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               12, 94
               

               Conread position:
               1-227
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               86, 130
               

               Conread position:
               1-423
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 112
               

               Conread position:
               1-423
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               1-429
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 76
               

               Conread position:
               1-444
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 116
               

               Conread position:
               1-468
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 17
               

               Conread position:
               1-470
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               1-486
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 128
               

               Conread position:
               1-486
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 127
               

               Conread position:
               1-492
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 128
               

               Conread position:
               2-199
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               20, 128
               

               Conread position:
               2-464
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 10
               

               Conread position:
               2-466
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 16
               

               Conread position:
               2-486
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 10
               

               Conread position:
               2-492
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               332
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               153, 21
               

               Conread position:
               4-193
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               10, 120
               

               Conread position:
               6-210
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               156, 7
               

               Conread position:
               6-492
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 125
               

               Conread position:
               7-226
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               170
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               152, 5
               

               Conread position:
               7-413
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 122
               

               Conread position:
               7-460
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 5
               

               Conread position:
               7-487
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 123
               

               Conread position:
               8-206
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               21, 122
               

               Conread position:
               8-223
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               99, 118
               

               Conread position:
               8-260
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               53, 61
               

               Conread position:
               8-316
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 115
               

               Conread position:
               8-429
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-488
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               327
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               51, 57
               

               Conread position:
               8-488
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 121
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 60
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 118
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 98
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 101
               

               Conread position:
               8-492
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 86
               

               Conread position:
               8-492
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 206
               

               Conread position:
               9-211
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               132, 110
               

               Conread position:
               15-460
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 92
               

               Conread position:
               16-486
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 103
               

               Conread position:
               18-269
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               97, 72
               

               Conread position:
               36-372
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               232
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               43, 79
               

               Conread position:
               64-489
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 66
               

               Conread position:
               78-489
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               287
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               42, 48
               

               Conread position:
               138-460
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 75
               

               Conread position:
               179-457
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               205, 157
               

               Conread position:
               188-466
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               49, 25
               

               Conread position:
               188-486
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               50, 25
               

               Conread position:
               200-492
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               31, 13
               

               Conread position:
               230-468
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               141, 26
               

               Conread position:
               241-453
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               128, 172
               

               Conread position:
               249-492
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 164
               

               Conread position:
               256-453
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               89, 108
               

               Conread position:
               304-492
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               108, 0
               
Show alignments to all cow chromosomes.