Cow genome map


           Conread name:
           Ss1.1-rpigcf0_021389.5
        

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               162, 126
               

               Conread position:
               1-284
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               114, 57
               

               Conread position:
               1-470
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 51
               

               Conread position:
               1-470
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 128
               

               Conread position:
               1-476
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               312
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               59, 68
               

               Conread position:
               1-477
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 128
               

               Conread position:
               1-486
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 128
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 89
               

               Conread position:
               1-492
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 98
               

               Conread position:
               1-492
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 133
               

               Conread position:
               2-226
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               14, 129
               

               Conread position:
               2-472
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               311
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               113, 69
               

               Conread position:
               2-474
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               312
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               94, 122
               

               Conread position:
               2-486
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 10
               

               Conread position:
               2-492
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 10
               

               Conread position:
               6-472
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 92
               

               Conread position:
               6-488
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 5
               

               Conread position:
               8-115
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-210
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-225
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               99, 118
               

               Conread position:
               8-454
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 121
               

               Conread position:
               8-465
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 102
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 122
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 102
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 121
               

               Conread position:
               8-492
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               12-207
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               145, 36
               

               Conread position:
               12-473
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 117
               

               Conread position:
               12-488
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               315
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               150, 115
               

               Conread position:
               15-489
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               329
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               175, 93
               

               Conread position:
               15-489
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 111
               

               Conread position:
               16-209
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               147, 7
               

               Conread position:
               16-489
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 93
               

               Conread position:
               18-470
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 112
               

               Conread position:
               19-284
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 110
               

               Conread position:
               32-471
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               284
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               74, 246
               

               Conread position:
               41-488
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 54
               

               Conread position:
               59-466
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 71
               

               Conread position:
               68-466
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 62
               

               Conread position:
               126-489
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               39, 193
               

               Conread position:
               188-404
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               241-492
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               191
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               44, 118
               

               Conread position:
               258-476
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               47, 155
               

               Conread position:
               264-468
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               303-489
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               304-474
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               304-492
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               124, 108
               

               Conread position:
               304-492
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               121, 108
               
Show alignments to all cow chromosomes.