Cow genome map


           Conread name:
           Ss1.1-rpigcf0_021389.5
        

               Conread position:
               1-210
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               99, 11
               

               Conread position:
               1-224
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               161, 44
               

               Conread position:
               1-224
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               60, 130
               

               Conread position:
               1-313
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               223
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               12, 126
               

               Conread position:
               1-379
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               252
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               161, 89
               

               Conread position:
               1-417
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 130
               

               Conread position:
               1-468
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               311
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               383, 55
               

               Conread position:
               1-468
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               309
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               221, 89
               

               Conread position:
               1-471
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               319
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               123, 89
               

               Conread position:
               1-474
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 96
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 123
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               328
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               103, 113
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 123
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 126
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 126
               

               Conread position:
               1-490
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 27
               

               Conread position:
               2-275
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               81, 88
               

               Conread position:
               2-283
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               85, 44
               

               Conread position:
               2-325
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               7, 108
               

               Conread position:
               2-398
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               261
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               37, 25
               

               Conread position:
               2-486
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 10
               

               Conread position:
               2-486
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 10
               

               Conread position:
               2-492
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 127
               

               Conread position:
               3-476
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 103
               

               Conread position:
               4-317
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 92
               

               Conread position:
               4-492
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 8
               

               Conread position:
               6-260
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               7, 124
               

               Conread position:
               6-487
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 108
               

               Conread position:
               8-197
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-211
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               155, 119
               

               Conread position:
               8-316
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               157, 101
               

               Conread position:
               8-453
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               294
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               21, 88
               

               Conread position:
               8-453
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 122
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 15
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 11
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 87
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 118
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 119
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 8
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 99
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 118
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 75
               

               Conread position:
               8-492
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 94
               

               Conread position:
               12-456
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 121
               

               Conread position:
               12-486
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 117
               

               Conread position:
               12-486
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               290
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               151, 133
               

               Conread position:
               12-486
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 117
               

               Conread position:
               12-486
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 117
               

               Conread position:
               12-489
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 83
               

               Conread position:
               13-216
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               102, 114
               

               Conread position:
               15-488
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 70
               

               Conread position:
               16-212
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               101, 111
               

               Conread position:
               16-423
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 99
               

               Conread position:
               17-475
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               312
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               98, 68
               

               Conread position:
               18-470
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 109
               

               Conread position:
               37-460
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 60
               

               Conread position:
               53-317
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               64, 73
               

               Conread position:
               66-226
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               91, 48
               

               Conread position:
               70-488
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               300
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               95, 60
               

               Conread position:
               82-420
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 48
               

               Conread position:
               90-487
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               277
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               75, 20
               

               Conread position:
               126-492
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 88
               

               Conread position:
               129-474
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               34, 79
               

               Conread position:
               191-492
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               30, 22
               

               Conread position:
               245-488
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               156, 40
               

               Conread position:
               249-468
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               258-468
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               272-492
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               281-470
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               93, 102
               

               Conread position:
               304-473
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               304-489
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               108, 0
               
Show alignments to all cow chromosomes.