Cow genome map


           Conread name:
           Ss1.1-rpigcf0_021389.5
        

               Conread position:
               1-190
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               161, 123
               

               Conread position:
               1-197
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               162, 126
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               100, 127
               

               Conread position:
               1-242
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               99, 24
               

               Conread position:
               1-420
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 82
               

               Conread position:
               1-423
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               291, 57
               

               Conread position:
               1-449
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 113
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 57
               

               Conread position:
               1-468
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 127
               

               Conread position:
               1-468
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 44
               

               Conread position:
               1-471
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               319
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               92, 206
               

               Conread position:
               1-474
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               310
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               9, 114
               

               Conread position:
               1-474
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 126
               

               Conread position:
               1-475
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 11
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 76
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 120
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 47
               

               Conread position:
               1-492
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 45
               

               Conread position:
               2-252
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               5, 28
               

               Conread position:
               2-360
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               255
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               161, 93
               

               Conread position:
               2-475
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 11
               

               Conread position:
               2-486
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 128
               

               Conread position:
               2-492
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 51
               

               Conread position:
               3-452
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 17
               

               Conread position:
               3-482
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               323
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               159, 124
               

               Conread position:
               4-217
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               70, 14
               

               Conread position:
               4-488
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 103
               

               Conread position:
               7-273
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               60, 77
               

               Conread position:
               7-463
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 126
               

               Conread position:
               7-464
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               341, 5
               

               Conread position:
               7-473
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 9
               

               Conread position:
               7-486
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 122
               

               Conread position:
               7-487
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               316
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               102, 135
               

               Conread position:
               7-491
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 71
               

               Conread position:
               7-492
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 32
               

               Conread position:
               7-492
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               335
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               117, 202
               

               Conread position:
               8-171
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               99, 118
               

               Conread position:
               8-216
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-217
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               154, 119
               

               Conread position:
               8-253
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               183
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               150, 121
               

               Conread position:
               8-261
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 27
               

               Conread position:
               8-274
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 121
               

               Conread position:
               8-274
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               155, 66
               

               Conread position:
               8-466
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 122
               

               Conread position:
               8-466
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-474
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               299
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               376, 8
               

               Conread position:
               8-477
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 48
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 117
               

               Conread position:
               8-488
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 121
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 62
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               320
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               273, 89
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 102
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 118
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 115
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 106
               

               Conread position:
               8-490
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 115
               

               Conread position:
               8-492
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               9-464
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 81
               

               Conread position:
               9-492
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 36
               

               Conread position:
               12-423
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 69
               

               Conread position:
               15-369
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 115
               

               Conread position:
               15-376
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 10
               

               Conread position:
               15-466
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 114
               

               Conread position:
               15-489
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 111
               

               Conread position:
               16-211
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               146, 49
               

               Conread position:
               36-345
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               122, 20
               

               Conread position:
               56-489
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               109, 69
               

               Conread position:
               59-225
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               48, 67
               

               Conread position:
               65-486
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 54
               

               Conread position:
               67-423
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               96, 39
               

               Conread position:
               97-432
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               66, 41
               

               Conread position:
               129-486
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               252
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               33, 85
               

               Conread position:
               160-373
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               28, 53
               

               Conread position:
               199-486
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               27, 14
               

               Conread position:
               237-475
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               262-418
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               265-458
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               277-476
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               149, 100
               

               Conread position:
               300-492
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               304-454
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               304-492
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               26, 19
               

               Conread position:
               335-473
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               77, 0
               
Show alignments to all cow chromosomes.