Cow genome map


           Conread name:
           Ss1.1-rpigcf0_021389.5
        

               Conread position:
               1-210
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               161, 46
               

               Conread position:
               1-317
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 90
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 126
               

               Conread position:
               1-466
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 31
               

               Conread position:
               1-469
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               274
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               162, 15
               

               Conread position:
               1-471
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 109
               

               Conread position:
               1-472
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 78
               

               Conread position:
               1-474
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               317
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               162, 105
               

               Conread position:
               1-474
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 24
               

               Conread position:
               1-474
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               320
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               161, 6
               

               Conread position:
               1-478
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               315
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               162, 94
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 69
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 123
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 95
               

               Conread position:
               1-492
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 128
               

               Conread position:
               2-217
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               86, 131
               

               Conread position:
               2-260
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               188
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               157, 127
               

               Conread position:
               2-486
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 10
               

               Conread position:
               2-492
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 10
               

               Conread position:
               3-433
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               305
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               39, 27
               

               Conread position:
               4-252
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               9, 64
               

               Conread position:
               4-280
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               154, 64
               

               Conread position:
               4-470
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               309
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               5, 88
               

               Conread position:
               5-474
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 90
               

               Conread position:
               6-283
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               203
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               120, 29
               

               Conread position:
               6-489
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 121
               

               Conread position:
               6-492
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 17
               

               Conread position:
               7-275
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               7-466
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 112
               

               Conread position:
               7-482
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 89
               

               Conread position:
               8-219
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               109, 118
               

               Conread position:
               8-282
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               158, 115
               

               Conread position:
               8-308
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 115
               

               Conread position:
               8-315
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               157, 98
               

               Conread position:
               8-317
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 118
               

               Conread position:
               8-317
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 118
               

               Conread position:
               8-430
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               268
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               93, 117
               

               Conread position:
               8-456
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 99
               

               Conread position:
               8-466
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               309
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               114, 98
               

               Conread position:
               8-469
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 129
               

               Conread position:
               8-470
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 87
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 105
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 116
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 115
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 117
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 118
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 55
               

               Conread position:
               8-492
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               312
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               139, 48
               

               Conread position:
               12-200
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               19, 119
               

               Conread position:
               12-240
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               153, 97
               

               Conread position:
               12-474
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               301
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               76, 27
               

               Conread position:
               13-486
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 116
               

               Conread position:
               36-487
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               314
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               129, 87
               

               Conread position:
               53-454
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 77
               

               Conread position:
               56-474
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 73
               

               Conread position:
               70-453
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               253
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               93, 60
               

               Conread position:
               100-317
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               14, 26
               

               Conread position:
               129-477
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               34, 65
               

               Conread position:
               160-469
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               224
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               172-492
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               77, 41
               

               Conread position:
               183-489
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               68, 29
               

               Conread position:
               191-486
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               262, 22
               

               Conread position:
               200-489
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               27, 220
               

               Conread position:
               220-489
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               31, 196
               

               Conread position:
               228-423
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               130, 22
               

               Conread position:
               246-473
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               295-492
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               68, 119
               

               Conread position:
               336-492
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               75, 0
               
Show alignments to all cow chromosomes.