Cow genome map


           Conread name:
           Ss1.1-rpigcf0_021389.5
        

               Conread position:
               1-198
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               113, 124
               

               Conread position:
               1-210
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               166
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               161, 22
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               161, 98
               

               Conread position:
               1-290
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               162, 71
               

               Conread position:
               1-468
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 126
               

               Conread position:
               1-470
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 109
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 125
               

               Conread position:
               1-492
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 118
               

               Conread position:
               1-492
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 125
               

               Conread position:
               1-492
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 124
               

               Conread position:
               2-201
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               157, 10
               

               Conread position:
               2-423
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               292
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               122, 10
               

               Conread position:
               2-426
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               284
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               160, 88
               

               Conread position:
               2-468
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               331
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               161, 45
               

               Conread position:
               7-477
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 18
               

               Conread position:
               8-236
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-317
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 85
               

               Conread position:
               8-317
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               215
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               97, 109
               

               Conread position:
               8-363
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-395
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 121
               

               Conread position:
               8-428
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 121
               

               Conread position:
               8-429
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 123
               

               Conread position:
               8-457
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 116
               

               Conread position:
               8-469
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 57
               

               Conread position:
               8-473
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               299
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               151, 79
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 35
               

               Conread position:
               8-487
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               323
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               157, 62
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               316
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               109, 87
               

               Conread position:
               8-492
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 121
               

               Conread position:
               12-457
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 86
               

               Conread position:
               12-486
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 117
               

               Conread position:
               12-488
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               326
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               153, 94
               

               Conread position:
               32-473
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 97
               

               Conread position:
               49-314
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 72
               

               Conread position:
               49-461
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 72
               

               Conread position:
               64-487
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 33
               

               Conread position:
               67-273
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               50, 59
               

               Conread position:
               137-423
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               90, 75
               

               Conread position:
               183-488
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               68, 29
               

               Conread position:
               224-365
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               295-489
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               78, 88
               

               Conread position:
               304-487
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               152, 111
               

               Conread position:
               308-489
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               104, 0
               
Show alignments to all cow chromosomes.