Cow genome map

Conread name: Ss1.1-rpigcf0_021389.5

Conread position: 1-224
Cow position:
Alignm length: 226
Alignm identity: 165
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 9, 127

Conread position: 1-290
Cow position:
Alignm length: 291
Alignm identity: 213
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 86, 52

Conread position: 1-320
Cow position:
Alignm length: 329
Alignm identity: 213
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 86, 123

Conread position: 1-474
Cow position:
Alignm length: 478
Alignm identity: 321
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 86, 24

Conread position: 1-475
Cow position:
Alignm length: 483
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 35

Conread position: 1-476
Cow position:
Alignm length: 481
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 48

Conread position: 1-477
Cow position:
Alignm length: 481
Alignm identity: 313
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 227, 18

Conread position: 1-477
Cow position:
Alignm length: 478
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 11

Conread position: 1-487
Cow position:
Alignm length: 515
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 65

Conread position: 1-487
Cow position:
Alignm length: 490
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 73

Conread position: 1-492
Cow position:
Alignm length: 493
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 126

Conread position: 1-492
Cow position:
Alignm length: 494
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 17

Conread position: 1-492
Cow position:
Alignm length: 495
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 11

Conread position: 2-205
Cow position:
Alignm length: 207
Alignm identity: 158
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 14, 29

Conread position: 2-460
Cow position:
Alignm length: 462
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 10

Conread position: 2-476
Cow position:
Alignm length: 484
Alignm identity: 310
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 12, 29

Conread position: 2-477
Cow position:
Alignm length: 484
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 10

Conread position: 2-487
Cow position:
Alignm length: 492
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 126

Conread position: 4-474
Cow position:
Alignm length: 475
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 90

Conread position: 4-477
Cow position:
Alignm length: 477
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 8

Conread position: 5-194
Cow position:
Alignm length: 191
Alignm identity: 144
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 160, 90

Conread position: 5-486
Cow position:
Alignm length: 491
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 125

Conread position: 7-477
Cow position:
Alignm length: 474
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 122

Conread position: 7-492
Cow position:
Alignm length: 492
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 85

Conread position: 8-182
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 153, 101

Conread position: 8-198
Cow position:
Alignm length: 192
Alignm identity: 143
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 154, 8

Conread position: 8-283
Cow position:
Alignm length: 279
Alignm identity: 192
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 157, 101

Conread position: 8-423
Cow position:
Alignm length: 418
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 121

Conread position: 8-429
Cow position:
Alignm length: 425
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-442
Cow position:
Alignm length: 442
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 115

Conread position: 8-453
Cow position:
Alignm length: 449
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 17

Conread position: 8-457
Cow position:
Alignm length: 451
Alignm identity: 291
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 154, 87

Conread position: 8-465
Cow position:
Alignm length: 461
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 121

Conread position: 8-466
Cow position:
Alignm length: 463
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-473
Cow position:
Alignm length: 474
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 119

Conread position: 8-477
Cow position:
Alignm length: 473
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 106

Conread position: 8-486
Cow position:
Alignm length: 485
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-486
Cow position:
Alignm length: 485
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 121

Conread position: 8-486
Cow position:
Alignm length: 485
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-486
Cow position:
Alignm length: 487
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 121

Conread position: 8-486
Cow position:
Alignm length: 483
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-486
Cow position:
Alignm length: 480
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 448, 17

Conread position: 8-487
Cow position:
Alignm length: 487
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-489
Cow position:
Alignm length: 507
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 118

Conread position: 8-489
Cow position:
Alignm length: 507
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 118

Conread position: 8-492
Cow position:
Alignm length: 505
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 88

Conread position: 12-456
Cow position:
Alignm length: 447
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 47

Conread position: 12-474
Cow position:
Alignm length: 466
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 117

Conread position: 12-492
Cow position:
Alignm length: 498
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 119

Conread position: 15-492
Cow position:
Alignm length: 484
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 79

Conread position: 41-492
Cow position:
Alignm length: 455
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 87

Conread position: 49-487
Cow position:
Alignm length: 463
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 74

Conread position: 59-486
Cow position:
Alignm length: 447
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 71

Conread position: 64-395
Cow position:
Alignm length: 336
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 66

Conread position: 64-475
Cow position:
Alignm length: 418
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 64-486
Cow position:
Alignm length: 427
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 66

Conread position: 67-477
Cow position:
Alignm length: 414
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 62

Conread position: 68-466
Cow position:
Alignm length: 402
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 61

Conread position: 68-486
Cow position:
Alignm length: 423
Alignm identity: 286
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 7, 18

Conread position: 72-476
Cow position:
Alignm length: 410
Alignm identity: 273
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 43, 23

Conread position: 74-469
Cow position:
Alignm length: 399
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 56

Conread position: 78-487
Cow position:
Alignm length: 412
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 52

Conread position: 220-489
Cow position:
Alignm length: 275
Alignm identity: 177
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 34, 80

Conread position: 230-468
Cow position:
Alignm length: 247
Alignm identity: 167
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 125, 85

Conread position: 232-489
Cow position:
Alignm length: 259
Alignm identity: 169
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 49, 64

Show alignments to all cow chromosomes.