Cow genome map

Conread name: Ss1.1-rpigcf0_021389.5

Conread position: 1-253
Cow position:
Alignm length: 256
Alignm identity: 169
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 124, 75

Conread position: 1-253
Cow position:
Alignm length: 258
Alignm identity: 171
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 75

Conread position: 1-317
Cow position:
Alignm length: 322
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 126

Conread position: 1-468
Cow position:
Alignm length: 468
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-488
Cow position:
Alignm length: 493
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 49

Conread position: 2-111
Cow position:
Alignm length: 112
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 14, 53

Conread position: 2-217
Cow position:
Alignm length: 218
Alignm identity: 160
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 7, 62

Conread position: 2-423
Cow position:
Alignm length: 424
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 130

Conread position: 2-454
Cow position:
Alignm length: 459
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 113

Conread position: 2-466
Cow position:
Alignm length: 465
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 2-472
Cow position:
Alignm length: 479
Alignm identity: 314
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 97, 23

Conread position: 2-473
Cow position:
Alignm length: 475
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 10

Conread position: 2-474
Cow position:
Alignm length: 476
Alignm identity: 327
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 161, 10

Conread position: 2-477
Cow position:
Alignm length: 480
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 10

Conread position: 2-486
Cow position:
Alignm length: 490
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 10

Conread position: 4-210
Cow position:
Alignm length: 208
Alignm identity: 148
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 159, 14

Conread position: 6-486
Cow position:
Alignm length: 488
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 90

Conread position: 7-429
Cow position:
Alignm length: 426
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 93

Conread position: 7-486
Cow position:
Alignm length: 482
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 112

Conread position: 7-492
Cow position:
Alignm length: 498
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 123

Conread position: 8-283
Cow position:
Alignm length: 280
Alignm identity: 194
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 111, 45

Conread position: 8-284
Cow position:
Alignm length: 281
Alignm identity: 201
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 109, 118

Conread position: 8-317
Cow position:
Alignm length: 314
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 118

Conread position: 8-429
Cow position:
Alignm length: 425
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-454
Cow position:
Alignm length: 450
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 65

Conread position: 8-463
Cow position:
Alignm length: 460
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-466
Cow position:
Alignm length: 462
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-466
Cow position:
Alignm length: 463
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 27

Conread position: 8-468
Cow position:
Alignm length: 462
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 106

Conread position: 8-470
Cow position:
Alignm length: 466
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 17

Conread position: 8-474
Cow position:
Alignm length: 470
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-477
Cow position:
Alignm length: 474
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-486
Cow position:
Alignm length: 487
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 118

Conread position: 8-486
Cow position:
Alignm length: 484
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-486
Cow position:
Alignm length: 484
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 125

Conread position: 8-486
Cow position:
Alignm length: 486
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-486
Cow position:
Alignm length: 486
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-489
Cow position:
Alignm length: 504
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 197

Conread position: 8-489
Cow position:
Alignm length: 505
Alignm identity: 331
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 157, 87

Conread position: 8-489
Cow position:
Alignm length: 507
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 116

Conread position: 8-489
Cow position:
Alignm length: 506
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 98

Conread position: 8-492
Cow position:
Alignm length: 508
Alignm identity: 337
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 157, 75

Conread position: 8-492
Cow position:
Alignm length: 493
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-492
Cow position:
Alignm length: 491
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 122

Conread position: 12-268
Cow position:
Alignm length: 260
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 117

Conread position: 12-477
Cow position:
Alignm length: 469
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 117

Conread position: 12-489
Cow position:
Alignm length: 504
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 108

Conread position: 12-492
Cow position:
Alignm length: 481
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 15-466
Cow position:
Alignm length: 467
Alignm identity: 321
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 129, 56

Conread position: 16-211
Cow position:
Alignm length: 197
Alignm identity: 141
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 149, 79

Conread position: 21-470
Cow position:
Alignm length: 451
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 86

Conread position: 24-252
Cow position:
Alignm length: 231
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 138, 58

Conread position: 26-423
Cow position:
Alignm length: 400
Alignm identity: 279
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 137, 69

Conread position: 86-489
Cow position:
Alignm length: 408
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 42

Conread position: 100-411
Cow position:
Alignm length: 313
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 30

Conread position: 126-487
Cow position:
Alignm length: 386
Alignm identity: 246
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 39, 193

Conread position: 129-486
Cow position:
Alignm length: 359
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 85

Conread position: 129-486
Cow position:
Alignm length: 359
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 85

Conread position: 188-470
Cow position:
Alignm length: 283
Alignm identity: 202
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 40, 0

Conread position: 230-468
Cow position:
Alignm length: 240
Alignm identity: 174
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 167, 183

Conread position: 234-456
Cow position:
Alignm length: 224
Alignm identity: 151
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 63, 33

Conread position: 245-492
Cow position:
Alignm length: 248
Alignm identity: 171
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 167, 0

Conread position: 262-487
Cow position:
Alignm length: 226
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 304-486
Cow position:
Alignm length: 187
Alignm identity: 132
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 152, 111

Conread position: 305-489
Cow position:
Alignm length: 185
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 107, 0

Conread position: 329-489
Cow position:
Alignm length: 161
Alignm identity: 116
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 83, 0

Show alignments to all cow chromosomes.