Cow genome map
| Conread name: | Ss1.1-rpigcf0_021389.5 |
| Conread position: | 1-201 |
| Cow position: | chr3:14588409-14588215 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 162, 31 |
| Conread position: | 1-210 |
| Cow position: | chr3:66119383-66119173 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 86, 132 |
| Conread position: | 1-217 |
| Cow position: | chr3:207433-207648 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 161, 126 |
| Conread position: | 1-217 |
| Cow position: | chr3:42580238-42580453 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 161, 120 |
| Conread position: | 1-217 |
| Cow position: | chr3:77474489-77474276 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 1-260 |
| Cow position: | chr3:6782118-6781857 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 193 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 12, 123 |
| Conread position: | 1-317 |
| Cow position: | chr3:32146357-32146673 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 224 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 12, 123 |
| Conread position: | 1-375 |
| Cow position: | chr3:50128148-50128511 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 70 |
| Conread position: | 1-423 |
| Cow position: | chr3:5829902-5830290 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 114 |
| Conread position: | 1-423 |
| Cow position: | chr3:18729405-18729820 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 75, 177 |
| Conread position: | 1-453 |
| Cow position: | chr3:56340693-56341150 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 128 |
| Conread position: | 1-456 |
| Cow position: | chr3:56650536-56650971 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 26 |
| Conread position: | 1-468 |
| Cow position: | chr3:2633655-2633212 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 315 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 127, 98 |
| Conread position: | 1-468 |
| Cow position: | chr3:5047457-5047891 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 317 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 105, 89 |
| Conread position: | 1-470 |
| Cow position: | chr3:64358438-64358901 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 39 |
| Conread position: | 1-471 |
| Cow position: | chr3:55229967-55230414 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 313 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 139, 85 |
| Conread position: | 1-474 |
| Cow position: | chr3:18357151-18357605 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 312 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 8, 81 |
| Conread position: | 1-474 |
| Cow position: | chr3:30929407-30928957 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 310 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 104, 124 |
| Conread position: | 1-476 |
| Cow position: | chr3:24591884-24592344 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 81 |
| Conread position: | 1-481 |
| Cow position: | chr3:66618914-66618471 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 114 |
| Conread position: | 1-482 |
| Cow position: | chr3:19802150-19801679 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 98 |
| Conread position: | 1-483 |
| Cow position: | chr3:39326417-39325956 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 18 |
| Conread position: | 1-486 |
| Cow position: | chr3:30314287-30313783 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 128 |
| Conread position: | 1-486 |
| Cow position: | chr3:36882184-36882659 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 129 |
| Conread position: | 1-486 |
| Cow position: | chr3:40823115-40822625 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 128 |
| Conread position: | 1-487 |
| Cow position: | chr3:2909367-2909832 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 49 |
| Conread position: | 1-487 |
| Cow position: | chr3:64028355-64028863 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 123 |
| Conread position: | 1-489 |
| Cow position: | chr3:17828919-17829424 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 123 |
| Conread position: | 1-489 |
| Cow position: | chr3:34396330-34396779 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 35 |
| Conread position: | 1-489 |
| Cow position: | chr3:37968812-37968308 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 123 |
| Conread position: | 1-489 |
| Cow position: | chr3:40340233-40340743 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 130 |
| Conread position: | 1-490 |
| Cow position: | chr3:6685188-6684708 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 220 |
| Conread position: | 1-491 |
| Cow position: | chr3:63005422-63005911 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 24 |
| Conread position: | 1-492 |
| Cow position: | chr3:52865022-52865506 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 58 |
| Conread position: | 2-207 |
| Cow position: | chr3:31898246-31898448 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 23, 99 |
| Conread position: | 2-273 |
| Cow position: | chr3:17936338-17936610 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 156, 83 |
| Conread position: | 2-423 |
| Cow position: | chr3:49545448-49545859 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 10 |
| Conread position: | 2-445 |
| Cow position: | chr3:31354529-31354935 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 10 |
| Conread position: | 2-454 |
| Cow position: | chr3:36691463-36691886 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 14 |
| Conread position: | 2-468 |
| Cow position: | chr3:2653835-2653398 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 301 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 352, 10 |
| Conread position: | 2-468 |
| Cow position: | chr3:9716537-9716097 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 125 |
| Conread position: | 2-468 |
| Cow position: | chr3:32842709-32843155 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 34 |
| Conread position: | 2-473 |
| Cow position: | chr3:5996144-5996603 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 10 |
| Conread position: | 2-474 |
| Cow position: | chr3:19692361-19692817 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 10 |
| Conread position: | 2-474 |
| Cow position: | chr3:21945677-21946138 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 10 |
| Conread position: | 2-477 |
| Cow position: | chr3:10239377-10238916 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 10 |
| Conread position: | 2-477 |
| Cow position: | chr3:38866129-38865671 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 10 |
| Conread position: | 2-477 |
| Cow position: | chr3:57484996-57485460 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 41 |
| Conread position: | 2-486 |
| Cow position: | chr3:21182957-21183427 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 10 |
| Conread position: | 2-486 |
| Cow position: | chr3:47273241-47273708 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 10 |
| Conread position: | 2-486 |
| Cow position: | chr3:72629796-72629327 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 10 |
| Conread position: | 3-283 |
| Cow position: | chr3:48231257-48231524 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 154, 88 |
| Conread position: | 4-397 |
| Cow position: | chr3:3980113-3979724 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 127 |
| Conread position: | 4-492 |
| Cow position: | chr3:32623284-32623788 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 74 |
| Conread position: | 7-167 |
| Cow position: | chr3:7168325-7168165 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 158, 116 |
| Conread position: | 7-476 |
| Cow position: | chr3:83295524-83295996 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 66 |
| Conread position: | 7-477 |
| Cow position: | chr3:14634378-14634823 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 115 |
| Conread position: | 7-486 |
| Cow position: | chr3:42431953-42431472 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 269, 122 |
| Conread position: | 8-160 |
| Cow position: | chr3:50915025-50914879 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 86 |
| Conread position: | 8-206 |
| Cow position: | chr3:47179484-47179682 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 109, 118 |
| Conread position: | 8-210 |
| Cow position: | chr3:19757240-19757442 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 151, 121 |
| Conread position: | 8-284 |
| Cow position: | chr3:41212018-41212295 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 115 |
| Conread position: | 8-301 |
| Cow position: | chr3:57856456-57856162 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 118 |
| Conread position: | 8-314 |
| Cow position: | chr3:45032461-45032156 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 115 |
| Conread position: | 8-317 |
| Cow position: | chr3:4285605-4285298 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 219 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 157, 107 |
| Conread position: | 8-317 |
| Cow position: | chr3:66891242-66891544 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 98, 41 |
| Conread position: | 8-352 |
| Cow position: | chr3:70083924-70084241 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 8-454 |
| Cow position: | chr3:64017644-64018076 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 121 |
| Conread position: | 8-465 |
| Cow position: | chr3:2711238-2711680 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 121 |
| Conread position: | 8-465 |
| Cow position: | chr3:5954467-5954893 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 112 |
| Conread position: | 8-466 |
| Cow position: | chr3:48061107-48061548 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 86 |
| Conread position: | 8-469 |
| Cow position: | chr3:5883260-5882811 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 121 |
| Conread position: | 8-477 |
| Cow position: | chr3:18542688-18543169 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 121 |
| Conread position: | 8-486 |
| Cow position: | chr3:18811222-18810754 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 17 |
| Conread position: | 8-486 |
| Cow position: | chr3:23291685-23292155 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 119 |
| Conread position: | 8-486 |
| Cow position: | chr3:43039972-43040436 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 121 |
| Conread position: | 8-486 |
| Cow position: | chr3:59861085-59860617 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 121 |
| Conread position: | 8-486 |
| Cow position: | chr3:69933117-69932651 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 122 |
| Conread position: | 8-486 |
| Cow position: | chr3:75041443-75041896 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 70 |
| Conread position: | 8-486 |
| Cow position: | chr3:78027691-78028162 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 121 |
| Conread position: | 8-487 |
| Cow position: | chr3:2917182-2916686 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 342 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 109, 118 |
| Conread position: | 8-487 |
| Cow position: | chr3:15989316-15989807 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 85 |
| Conread position: | 8-487 |
| Cow position: | chr3:22335612-22335120 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 102 |
| Conread position: | 8-487 |
| Cow position: | chr3:72704917-72704417 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 118 |
| Conread position: | 8-488 |
| Cow position: | chr3:19938633-19938143 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 330 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 150, 115 |
| Conread position: | 8-489 |
| Cow position: | chr3:24314198-24313696 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 118 |
| Conread position: | 8-489 |
| Cow position: | chr3:36117382-36116884 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 111 |
| Conread position: | 8-489 |
| Cow position: | chr3:46678193-46678695 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 115 |
| Conread position: | 8-489 |
| Cow position: | chr3:47081938-47082425 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 332 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 157, 86 |
| Conread position: | 8-489 |
| Cow position: | chr3:49614257-49614754 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 98 |
| Conread position: | 8-492 |
| Cow position: | chr3:14440009-14440508 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 39 |
| Conread position: | 8-492 |
| Cow position: | chr3:46861578-46862083 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 199 |
| Conread position: | 8-492 |
| Cow position: | chr3:49677479-49676997 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 62 |
| Conread position: | 8-492 |
| Cow position: | chr3:64650351-64649839 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 87 |
| Conread position: | 12-236 |
| Cow position: | chr3:56321026-56320805 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 150, 97 |
| Conread position: | 12-281 |
| Cow position: | chr3:45775353-45775617 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 103, 78 |
| Conread position: | 12-318 |
| Cow position: | chr3:19878378-19878073 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 218 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 153, 111 |
| Conread position: | 12-463 |
| Cow position: | chr3:15178027-15177594 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 33 |
| Conread position: | 12-466 |
| Cow position: | chr3:34031181-34031622 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 116 |
| Conread position: | 12-472 |
| Cow position: | chr3:50209085-50208637 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 311 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 7, 106 |
| Conread position: | 12-485 |
| Cow position: | chr3:3054328-3053878 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 121 |
| Conread position: | 12-489 |
| Cow position: | chr3:3522730-3522233 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 111 |
| Conread position: | 16-486 |
| Cow position: | chr3:594301-593849 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 113 |
| Conread position: | 25-284 |
| Cow position: | chr3:49140705-49140961 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 67, 61 |
| Conread position: | 36-317 |
| Cow position: | chr3:24359953-24359671 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 71, 90 |
| Conread position: | 45-479 |
| Cow position: | chr3:34093716-34094129 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 278 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 123, 60 |
| Conread position: | 49-470 |
| Cow position: | chr3:83234412-83234817 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 272 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 176, 66 |
| Conread position: | 53-465 |
| Cow position: | chr3:46502710-46502300 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 78 |
| Conread position: | 53-489 |
| Cow position: | chr3:36099040-36099458 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 37 |
| Conread position: | 64-423 |
| Cow position: | chr3:66637710-66637376 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 67-218 |
| Cow position: | chr3:19943736-19943590 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 95, 13 |
| Conread position: | 77-411 |
| Cow position: | chr3:18464099-18464430 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 53 |
| Conread position: | 88-486 |
| Cow position: | chr3:53515373-53514982 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 42 |
| Conread position: | 101-487 |
| Cow position: | chr3:17951295-17950918 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 29 |
| Conread position: | 169-486 |
| Cow position: | chr3:43193145-43193452 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 62, 44 |
| Conread position: | 207-466 |
| Cow position: | chr3:19757726-19757973 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 30, 83 |
| Conread position: | 230-444 |
| Cow position: | chr3:44255456-44255664 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 230-472 |
| Cow position: | chr3:57500013-57500257 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 53, 155 |
| Conread position: | 233-470 |
| Cow position: | chr3:48329915-48329686 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 166, 51 |
| Conread position: | 241-474 |
| Cow position: | chr3:66119168-66118937 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 184, 67 |
| Conread position: | 264-460 |
| Cow position: | chr3:27905795-27905985 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 16, 114 |
| Conread position: | 295-489 |
| Cow position: | chr3:47616508-47616701 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 295-492 |
| Cow position: | chr3:6781535-6781339 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 302-460 |
| Cow position: | chr3:44256734-44256889 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 304-486 |
| Cow position: | chr3:14888718-14888538 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 304-489 |
| Cow position: | chr3:2369757-2369941 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 304-489 |
| Cow position: | chr3:48841052-48840868 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 304-489 |
| Cow position: | chr3:66805237-66805051 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 160, 111 |
| Conread position: | 304-492 |
| Cow position: | chr3:56320288-56320104 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 319-474 |
| Cow position: | chr3:60210718-60210872 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
Show alignments to all cow chromosomes.