Cow genome map

Conread name: Ss1.1-rpigcf0_021389.5

Conread position: 1-201
Cow position:
Alignm length: 202
Alignm identity: 154
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 162, 31

Conread position: 1-210
Cow position:
Alignm length: 214
Alignm identity: 162
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 86, 132

Conread position: 1-217
Cow position:
Alignm length: 218
Alignm identity: 165
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 161, 126

Conread position: 1-217
Cow position:
Alignm length: 218
Alignm identity: 162
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 161, 120

Conread position: 1-217
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 126, 0

Conread position: 1-260
Cow position:
Alignm length: 264
Alignm identity: 193
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 12, 123

Conread position: 1-317
Cow position:
Alignm length: 321
Alignm identity: 224
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 12, 123

Conread position: 1-375
Cow position:
Alignm length: 377
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 70

Conread position: 1-423
Cow position:
Alignm length: 424
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 114

Conread position: 1-423
Cow position:
Alignm length: 437
Alignm identity: 284
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 75, 177

Conread position: 1-453
Cow position:
Alignm length: 463
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 128

Conread position: 1-456
Cow position:
Alignm length: 462
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 26

Conread position: 1-468
Cow position:
Alignm length: 471
Alignm identity: 315
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 127, 98

Conread position: 1-468
Cow position:
Alignm length: 470
Alignm identity: 317
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 105, 89

Conread position: 1-470
Cow position:
Alignm length: 473
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 39

Conread position: 1-471
Cow position:
Alignm length: 474
Alignm identity: 313
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 139, 85

Conread position: 1-474
Cow position:
Alignm length: 477
Alignm identity: 312
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 8, 81

Conread position: 1-474
Cow position:
Alignm length: 480
Alignm identity: 310
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 104, 124

Conread position: 1-476
Cow position:
Alignm length: 479
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 81

Conread position: 1-481
Cow position:
Alignm length: 483
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 114

Conread position: 1-482
Cow position:
Alignm length: 485
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 98

Conread position: 1-483
Cow position:
Alignm length: 485
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 18

Conread position: 1-486
Cow position:
Alignm length: 508
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 128

Conread position: 1-486
Cow position:
Alignm length: 494
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 129

Conread position: 1-486
Cow position:
Alignm length: 497
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 128

Conread position: 1-487
Cow position:
Alignm length: 490
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 49

Conread position: 1-487
Cow position:
Alignm length: 512
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 123

Conread position: 1-489
Cow position:
Alignm length: 511
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 123

Conread position: 1-489
Cow position:
Alignm length: 490
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 35

Conread position: 1-489
Cow position:
Alignm length: 509
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 123

Conread position: 1-489
Cow position:
Alignm length: 515
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 130

Conread position: 1-490
Cow position:
Alignm length: 499
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 220

Conread position: 1-491
Cow position:
Alignm length: 504
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 24

Conread position: 1-492
Cow position:
Alignm length: 496
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 58

Conread position: 2-207
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 23, 99

Conread position: 2-273
Cow position:
Alignm length: 276
Alignm identity: 178
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 156, 83

Conread position: 2-423
Cow position:
Alignm length: 431
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 10

Conread position: 2-445
Cow position:
Alignm length: 445
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 10

Conread position: 2-454
Cow position:
Alignm length: 457
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 14

Conread position: 2-468
Cow position:
Alignm length: 471
Alignm identity: 301
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 352, 10

Conread position: 2-468
Cow position:
Alignm length: 468
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 125

Conread position: 2-468
Cow position:
Alignm length: 468
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 34

Conread position: 2-473
Cow position:
Alignm length: 477
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 10

Conread position: 2-474
Cow position:
Alignm length: 477
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 10

Conread position: 2-474
Cow position:
Alignm length: 482
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 10

Conread position: 2-477
Cow position:
Alignm length: 479
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 10

Conread position: 2-477
Cow position:
Alignm length: 479
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 10

Conread position: 2-477
Cow position:
Alignm length: 483
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 41

Conread position: 2-486
Cow position:
Alignm length: 493
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 10

Conread position: 2-486
Cow position:
Alignm length: 488
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 10

Conread position: 2-486
Cow position:
Alignm length: 486
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 10

Conread position: 3-283
Cow position:
Alignm length: 282
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 154, 88

Conread position: 4-397
Cow position:
Alignm length: 399
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 127

Conread position: 4-492
Cow position:
Alignm length: 515
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 74

Conread position: 7-167
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 158, 116

Conread position: 7-476
Cow position:
Alignm length: 480
Alignm identity: 289
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 66

Conread position: 7-477
Cow position:
Alignm length: 474
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 115

Conread position: 7-486
Cow position:
Alignm length: 492
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 122

Conread position: 8-160
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 86

Conread position: 8-206
Cow position:
Alignm length: 201
Alignm identity: 151
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 109, 118

Conread position: 8-210
Cow position:
Alignm length: 204
Alignm identity: 156
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 151, 121

Conread position: 8-284
Cow position:
Alignm length: 280
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 115

Conread position: 8-301
Cow position:
Alignm length: 298
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 118

Conread position: 8-314
Cow position:
Alignm length: 311
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 115

Conread position: 8-317
Cow position:
Alignm length: 313
Alignm identity: 219
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 157, 107

Conread position: 8-317
Cow position:
Alignm length: 314
Alignm identity: 216
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 98, 41

Conread position: 8-352
Cow position:
Alignm length: 345
Alignm identity: 232
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 8-454
Cow position:
Alignm length: 448
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-465
Cow position:
Alignm length: 462
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-465
Cow position:
Alignm length: 459
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 112

Conread position: 8-466
Cow position:
Alignm length: 462
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 86

Conread position: 8-469
Cow position:
Alignm length: 465
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-477
Cow position:
Alignm length: 486
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-486
Cow position:
Alignm length: 486
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 17

Conread position: 8-486
Cow position:
Alignm length: 486
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 119

Conread position: 8-486
Cow position:
Alignm length: 486
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-486
Cow position:
Alignm length: 484
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-486
Cow position:
Alignm length: 484
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 122

Conread position: 8-486
Cow position:
Alignm length: 486
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 70

Conread position: 8-486
Cow position:
Alignm length: 487
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-487
Cow position:
Alignm length: 509
Alignm identity: 342
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 109, 118

Conread position: 8-487
Cow position:
Alignm length: 504
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 85

Conread position: 8-487
Cow position:
Alignm length: 503
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 102

Conread position: 8-487
Cow position:
Alignm length: 505
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 118

Conread position: 8-488
Cow position:
Alignm length: 501
Alignm identity: 330
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 150, 115

Conread position: 8-489
Cow position:
Alignm length: 507
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 118

Conread position: 8-489
Cow position:
Alignm length: 506
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 111

Conread position: 8-489
Cow position:
Alignm length: 506
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 115

Conread position: 8-489
Cow position:
Alignm length: 503
Alignm identity: 332
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 157, 86

Conread position: 8-489
Cow position:
Alignm length: 506
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 98

Conread position: 8-492
Cow position:
Alignm length: 509
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 39

Conread position: 8-492
Cow position:
Alignm length: 509
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 199

Conread position: 8-492
Cow position:
Alignm length: 488
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 62

Conread position: 8-492
Cow position:
Alignm length: 516
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 87

Conread position: 12-236
Cow position:
Alignm length: 226
Alignm identity: 163
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 150, 97

Conread position: 12-281
Cow position:
Alignm length: 273
Alignm identity: 192
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 103, 78

Conread position: 12-318
Cow position:
Alignm length: 310
Alignm identity: 218
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 153, 111

Conread position: 12-463
Cow position:
Alignm length: 455
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 33

Conread position: 12-466
Cow position:
Alignm length: 458
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 116

Conread position: 12-472
Cow position:
Alignm length: 471
Alignm identity: 311
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 7, 106

Conread position: 12-485
Cow position:
Alignm length: 475
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 12-489
Cow position:
Alignm length: 502
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 111

Conread position: 16-486
Cow position:
Alignm length: 476
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 113

Conread position: 25-284
Cow position:
Alignm length: 263
Alignm identity: 184
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 67, 61

Conread position: 36-317
Cow position:
Alignm length: 286
Alignm identity: 201
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 71, 90

Conread position: 45-479
Cow position:
Alignm length: 437
Alignm identity: 278
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 123, 60

Conread position: 49-470
Cow position:
Alignm length: 427
Alignm identity: 272
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 176, 66

Conread position: 53-465
Cow position:
Alignm length: 424
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 78

Conread position: 53-489
Cow position:
Alignm length: 442
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 37

Conread position: 64-423
Cow position:
Alignm length: 360
Alignm identity: 247
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 66, 0

Conread position: 67-218
Cow position:
Alignm length: 153
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 95, 13

Conread position: 77-411
Cow position:
Alignm length: 336
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 53

Conread position: 88-486
Cow position:
Alignm length: 408
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 42

Conread position: 101-487
Cow position:
Alignm length: 389
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 29

Conread position: 169-486
Cow position:
Alignm length: 322
Alignm identity: 224
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 62, 44

Conread position: 207-466
Cow position:
Alignm length: 263
Alignm identity: 183
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 30, 83

Conread position: 230-444
Cow position:
Alignm length: 215
Alignm identity: 159
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 144, 0

Conread position: 230-472
Cow position:
Alignm length: 251
Alignm identity: 172
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 155

Conread position: 233-470
Cow position:
Alignm length: 239
Alignm identity: 164
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 166, 51

Conread position: 241-474
Cow position:
Alignm length: 239
Alignm identity: 167
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 184, 67

Conread position: 264-460
Cow position:
Alignm length: 199
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 114

Conread position: 295-489
Cow position:
Alignm length: 195
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 117, 0

Conread position: 295-492
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 117, 0

Conread position: 302-460
Cow position:
Alignm length: 159
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 304-486
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 109, 0

Conread position: 304-489
Cow position:
Alignm length: 186
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 304-489
Cow position:
Alignm length: 186
Alignm identity: 129
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 304-489
Cow position:
Alignm length: 188
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 160, 111

Conread position: 304-492
Cow position:
Alignm length: 189
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 319-474
Cow position:
Alignm length: 156
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 93, 0

Show alignments to all cow chromosomes.