Cow genome map


           Conread name:
           Ss1.1-rpigcf0_021389.5
        

               Conread position:
               1-371
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               114, 19
               

               Conread position:
               1-427
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               89, 181
               

               Conread position:
               1-444
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-460
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 47
               

               Conread position:
               1-466
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 128
               

               Conread position:
               1-468
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 82
               

               Conread position:
               1-486
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               435, 64
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 123
               

               Conread position:
               1-492
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               344
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               12, 219
               

               Conread position:
               1-492
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 66
               

               Conread position:
               2-272
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               160, 53
               

               Conread position:
               2-466
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 10
               

               Conread position:
               2-486
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 14
               

               Conread position:
               2-486
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 7
               

               Conread position:
               2-492
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 125
               

               Conread position:
               7-317
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               223
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               6, 111
               

               Conread position:
               7-440
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               286
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               21, 112
               

               Conread position:
               8-206
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-226
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-260
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               61, 122
               

               Conread position:
               8-316
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               221
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               150, 99
               

               Conread position:
               8-317
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 118
               

               Conread position:
               8-395
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 20
               

               Conread position:
               8-453
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-454
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-454
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 123
               

               Conread position:
               8-454
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 79
               

               Conread position:
               8-466
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 122
               

               Conread position:
               8-466
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-477
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-477
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-479
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 45
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 47
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-487
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 115
               

               Conread position:
               8-488
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 115
               

               Conread position:
               8-488
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               342
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               109, 118
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 123
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 79
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 117
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 101
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 118
               

               Conread position:
               8-492
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               9-224
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               77, 125
               

               Conread position:
               12-477
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 119
               

               Conread position:
               12-489
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 114
               

               Conread position:
               12-489
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 107
               

               Conread position:
               15-489
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 108
               

               Conread position:
               16-492
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               330
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               91, 79
               

               Conread position:
               18-429
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 101
               

               Conread position:
               18-486
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 111
               

               Conread position:
               25-225
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               40, 52
               

               Conread position:
               31-190
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               68, 83
               

               Conread position:
               37-456
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               277
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               125, 68
               

               Conread position:
               64-476
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               320, 33
               

               Conread position:
               73-460
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 49
               

               Conread position:
               79-486
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 52
               

               Conread position:
               103-487
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               242
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               67, 147
               

               Conread position:
               183-489
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               98, 29
               

               Conread position:
               241-422
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               143, 52
               

               Conread position:
               304-487
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               151, 111
               

               Conread position:
               304-489
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               108, 0
               
Show alignments to all cow chromosomes.