Cow genome map
| Conread name: | Ss1.1-rpigcf0_021389.5 |
| Conread position: | 1-193 |
| Cow position: | chr5:29123170-29123362 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 178, 113 |
| Conread position: | 1-209 |
| Cow position: | chr5:41551299-41551503 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 165 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 162, 106 |
| Conread position: | 1-210 |
| Cow position: | chr5:32733619-32733826 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 162, 122 |
| Conread position: | 1-217 |
| Cow position: | chr5:9686788-9686996 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 161, 94 |
| Conread position: | 1-217 |
| Cow position: | chr5:45699906-45699692 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 168 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 161, 123 |
| Conread position: | 1-317 |
| Cow position: | chr5:59060251-59059927 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 228 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 12, 211 |
| Conread position: | 1-373 |
| Cow position: | chr5:6519516-6519160 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 11 |
| Conread position: | 1-405 |
| Cow position: | chr5:34202572-34202196 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 24 |
| Conread position: | 1-426 |
| Cow position: | chr5:54620093-54619699 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 77, 110 |
| Conread position: | 1-432 |
| Cow position: | chr5:26090200-26090650 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 251 |
| Conread position: | 1-450 |
| Cow position: | chr5:76123925-76124357 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 300 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 114, 126 |
| Conread position: | 1-453 |
| Cow position: | chr5:26769436-26769008 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 57 |
| Conread position: | 1-460 |
| Cow position: | chr5:58747510-58747069 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 22 |
| Conread position: | 1-466 |
| Cow position: | chr5:27488645-27488202 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 44 |
| Conread position: | 1-468 |
| Cow position: | chr5:28031110-28030686 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 311 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 166, 24 |
| Conread position: | 1-468 |
| Cow position: | chr5:29008985-29008557 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 311 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-471 |
| Cow position: | chr5:58056109-58056559 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 306 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 111, 80 |
| Conread position: | 1-472 |
| Cow position: | chr5:46659349-46658868 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 17 |
| Conread position: | 1-477 |
| Cow position: | chr5:14346748-14347206 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 298 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 124, 81 |
| Conread position: | 1-482 |
| Cow position: | chr5:23716321-23716792 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 56 |
| Conread position: | 1-486 |
| Cow position: | chr5:30578948-30578476 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 124 |
| Conread position: | 1-488 |
| Cow position: | chr5:10443576-10444081 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 342 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 12, 74 |
| Conread position: | 1-488 |
| Cow position: | chr5:27909641-27910151 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 123 |
| Conread position: | 1-489 |
| Cow position: | chr5:48468651-48469155 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 68 |
| Conread position: | 1-489 |
| Cow position: | chr5:52804960-52804508 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 126 |
| Conread position: | 1-489 |
| Cow position: | chr5:53714883-53714373 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 123 |
| Conread position: | 1-490 |
| Cow position: | chr5:49593833-49594326 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 129 |
| Conread position: | 1-492 |
| Cow position: | chr5:41529942-41530426 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 136 |
| Conread position: | 2-210 |
| Cow position: | chr5:29454239-29454445 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 60, 78 |
| Conread position: | 2-224 |
| Cow position: | chr5:39165171-39165394 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 5, 127 |
| Conread position: | 2-287 |
| Cow position: | chr5:58090195-58090487 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 22, 59 |
| Conread position: | 2-459 |
| Cow position: | chr5:23755954-23756380 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 305 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 5, 89 |
| Conread position: | 2-464 |
| Cow position: | chr5:3785435-3784990 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 10 |
| Conread position: | 2-465 |
| Cow position: | chr5:55627628-55627180 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 10 |
| Conread position: | 2-468 |
| Cow position: | chr5:24329923-24329488 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 10 |
| Conread position: | 2-470 |
| Cow position: | chr5:46630800-46631230 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 114 |
| Conread position: | 2-474 |
| Cow position: | chr5:48809089-48809544 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 2-486 |
| Cow position: | chr5:7273489-7273020 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 10 |
| Conread position: | 2-492 |
| Cow position: | chr5:32945507-32945030 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 113 |
| Conread position: | 4-184 |
| Cow position: | chr5:31101975-31102150 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 105, 8 |
| Conread position: | 6-317 |
| Cow position: | chr5:46644331-46644023 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 7, 121 |
| Conread position: | 6-489 |
| Cow position: | chr5:46775706-46775209 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 101 |
| Conread position: | 7-317 |
| Cow position: | chr5:45182481-45182783 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 103 |
| Conread position: | 8-115 |
| Cow position: | chr5:29042130-29042023 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-154 |
| Cow position: | chr5:54932599-54932744 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 8-194 |
| Cow position: | chr5:12185279-12185093 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 151, 121 |
| Conread position: | 8-225 |
| Cow position: | chr5:18665580-18665364 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 105, 118 |
| Conread position: | 8-272 |
| Cow position: | chr5:35299682-35299417 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 157, 115 |
| Conread position: | 8-317 |
| Cow position: | chr5:24576532-24576223 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 217 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 40, 118 |
| Conread position: | 8-317 |
| Cow position: | chr5:26079600-26079909 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 118 |
| Conread position: | 8-424 |
| Cow position: | chr5:59481873-59481434 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 59 |
| Conread position: | 8-454 |
| Cow position: | chr5:416101-416535 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 101 |
| Conread position: | 8-454 |
| Cow position: | chr5:2430514-2430946 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 44 |
| Conread position: | 8-454 |
| Cow position: | chr5:4068609-4068179 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 122 |
| Conread position: | 8-454 |
| Cow position: | chr5:37731964-37731530 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 125 |
| Conread position: | 8-457 |
| Cow position: | chr5:27000816-27000386 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 8-465 |
| Cow position: | chr5:6158578-6159018 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 88 |
| Conread position: | 8-465 |
| Cow position: | chr5:64782398-64782839 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 121 |
| Conread position: | 8-466 |
| Cow position: | chr5:59282381-59281936 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 121 |
| Conread position: | 8-468 |
| Cow position: | chr5:49181900-49181478 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 74 |
| Conread position: | 8-476 |
| Cow position: | chr5:23227879-23227430 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 65 |
| Conread position: | 8-477 |
| Cow position: | chr5:10918416-10917966 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 121 |
| Conread position: | 8-486 |
| Cow position: | chr5:1342177-1342644 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 121 |
| Conread position: | 8-486 |
| Cow position: | chr5:2914069-2913601 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 121 |
| Conread position: | 8-486 |
| Cow position: | chr5:24098267-24097805 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 123 |
| Conread position: | 8-486 |
| Cow position: | chr5:34696202-34695735 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 57 |
| Conread position: | 8-486 |
| Cow position: | chr5:54792999-54793466 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 121 |
| Conread position: | 8-487 |
| Cow position: | chr5:14379781-14379287 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 99 |
| Conread position: | 8-487 |
| Cow position: | chr5:46738966-46739453 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 121 |
| Conread position: | 8-489 |
| Cow position: | chr5:2530889-2530393 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 89 |
| Conread position: | 8-489 |
| Cow position: | chr5:4019580-4020076 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 115 |
| Conread position: | 8-489 |
| Cow position: | chr5:10776634-10777127 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 115 |
| Conread position: | 8-489 |
| Cow position: | chr5:10844256-10844756 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 122 |
| Conread position: | 8-489 |
| Cow position: | chr5:18663866-18663363 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 118 |
| Conread position: | 8-489 |
| Cow position: | chr5:23960489-23960989 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 115 |
| Conread position: | 8-489 |
| Cow position: | chr5:31706193-31705695 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 102 |
| Conread position: | 8-489 |
| Cow position: | chr5:32772100-32771594 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 115 |
| Conread position: | 8-489 |
| Cow position: | chr5:37755520-37756022 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 118 |
| Conread position: | 8-489 |
| Cow position: | chr5:47831486-47831976 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 339 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 157, 67 |
| Conread position: | 8-489 |
| Cow position: | chr5:58195621-58195123 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 116 |
| Conread position: | 8-489 |
| Cow position: | chr5:59144400-59143897 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 118 |
| Conread position: | 8-492 |
| Cow position: | chr5:3504628-3505098 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 108 |
| Conread position: | 8-492 |
| Cow position: | chr5:32674117-32674590 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 59 |
| Conread position: | 8-492 |
| Cow position: | chr5:46663620-46663119 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 116 |
| Conread position: | 8-492 |
| Cow position: | chr5:57482928-57483398 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 121 |
| Conread position: | 8-492 |
| Cow position: | chr5:61273549-61274022 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 102 |
| Conread position: | 12-456 |
| Cow position: | chr5:34167683-34167251 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 292 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 151, 95 |
| Conread position: | 12-456 |
| Cow position: | chr5:56858082-56858519 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 299 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 89, 58 |
| Conread position: | 12-482 |
| Cow position: | chr5:12681894-12682346 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 58 |
| Conread position: | 12-486 |
| Cow position: | chr5:49119663-49120127 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 118 |
| Conread position: | 13-465 |
| Cow position: | chr5:25001309-25001737 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 304 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 150, 63 |
| Conread position: | 15-486 |
| Cow position: | chr5:4384841-4384379 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 114 |
| Conread position: | 15-489 |
| Cow position: | chr5:42504367-42503881 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 111 |
| Conread position: | 16-317 |
| Cow position: | chr5:3964081-3963788 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 93 |
| Conread position: | 18-209 |
| Cow position: | chr5:12644261-12644457 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 57, 116 |
| Conread position: | 18-492 |
| Cow position: | chr5:41963323-41963783 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 104 |
| Conread position: | 21-476 |
| Cow position: | chr5:23687864-23688314 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 94 |
| Conread position: | 49-492 |
| Cow position: | chr5:28006797-28006378 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 47 |
| Conread position: | 70-283 |
| Cow position: | chr5:73489769-73489983 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 89, 59 |
| Conread position: | 86-492 |
| Cow position: | chr5:46005889-46006280 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 45 |
| Conread position: | 96-476 |
| Cow position: | chr5:27060544-27060908 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 260 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 9, 24 |
| Conread position: | 124-474 |
| Cow position: | chr5:52433342-52433011 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 232 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 218, 24 |
| Conread position: | 129-492 |
| Cow position: | chr5:29457121-29456774 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 47 |
| Conread position: | 165-474 |
| Cow position: | chr5:29123566-29123866 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 82, 49 |
| Conread position: | 183-489 |
| Cow position: | chr5:308156-308462 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 68, 29 |
| Conread position: | 183-489 |
| Cow position: | chr5:13383857-13384162 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 68, 29 |
| Conread position: | 188-477 |
| Cow position: | chr5:12184682-12184404 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 39, 25 |
| Conread position: | 188-489 |
| Cow position: | chr5:54936091-54936393 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 63, 24 |
| Conread position: | 196-486 |
| Cow position: | chr5:49123396-49123677 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 35, 17 |
| Conread position: | 230-489 |
| Cow position: | chr5:27652544-27652802 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 226, 167 |
| Conread position: | 230-492 |
| Cow position: | chr5:13607363-13607612 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 231-478 |
| Cow position: | chr5:14500751-14500987 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 7, 58 |
| Conread position: | 261-492 |
| Cow position: | chr5:45699407-45699180 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 319-488 |
| Cow position: | chr5:45182819-45182987 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 94, 0 |
Show alignments to all cow chromosomes.