Cow genome map

Conread name: Ss1.1-rpigcf0_021389.5

Conread position: 1-210
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 72, 119

Conread position: 1-222
Cow position:
Alignm length: 223
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 162, 8

Conread position: 1-252
Cow position:
Alignm length: 254
Alignm identity: 184
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 161, 44

Conread position: 1-270
Cow position:
Alignm length: 273
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 128

Conread position: 1-282
Cow position:
Alignm length: 288
Alignm identity: 190
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 162, 89

Conread position: 1-291
Cow position:
Alignm length: 298
Alignm identity: 182
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 12, 124

Conread position: 1-423
Cow position:
Alignm length: 424
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 36

Conread position: 1-473
Cow position:
Alignm length: 474
Alignm identity: 325
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 99, 116

Conread position: 1-481
Cow position:
Alignm length: 486
Alignm identity: 305
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 114, 94

Conread position: 1-486
Cow position:
Alignm length: 501
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 134

Conread position: 1-489
Cow position:
Alignm length: 517
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 211

Conread position: 1-489
Cow position:
Alignm length: 520
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 106

Conread position: 1-489
Cow position:
Alignm length: 514
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 123

Conread position: 1-489
Cow position:
Alignm length: 514
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 122

Conread position: 1-492
Cow position:
Alignm length: 493
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 383, 11

Conread position: 1-492
Cow position:
Alignm length: 498
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 83

Conread position: 2-211
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 90, 0

Conread position: 2-217
Cow position:
Alignm length: 218
Alignm identity: 160
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 85, 126

Conread position: 2-226
Cow position:
Alignm length: 226
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 160, 10

Conread position: 2-456
Cow position:
Alignm length: 464
Alignm identity: 317
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 101, 27

Conread position: 2-460
Cow position:
Alignm length: 462
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 24

Conread position: 2-465
Cow position:
Alignm length: 467
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 77

Conread position: 2-466
Cow position:
Alignm length: 468
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 10

Conread position: 2-469
Cow position:
Alignm length: 469
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 10

Conread position: 2-486
Cow position:
Alignm length: 493
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 10

Conread position: 2-486
Cow position:
Alignm length: 487
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 128

Conread position: 2-486
Cow position:
Alignm length: 490
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 14

Conread position: 2-487
Cow position:
Alignm length: 493
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 10

Conread position: 6-455
Cow position:
Alignm length: 468
Alignm identity: 312
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 156, 22

Conread position: 7-238
Cow position:
Alignm length: 234
Alignm identity: 175
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 15, 5

Conread position: 7-260
Cow position:
Alignm length: 258
Alignm identity: 189
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 154, 5

Conread position: 7-260
Cow position:
Alignm length: 257
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 23

Conread position: 7-458
Cow position:
Alignm length: 456
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 120

Conread position: 7-479
Cow position:
Alignm length: 476
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 5

Conread position: 7-484
Cow position:
Alignm length: 483
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 122

Conread position: 7-486
Cow position:
Alignm length: 494
Alignm identity: 320
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 157, 123

Conread position: 7-492
Cow position:
Alignm length: 488
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 88

Conread position: 8-209
Cow position:
Alignm length: 203
Alignm identity: 153
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 151, 121

Conread position: 8-210
Cow position:
Alignm length: 204
Alignm identity: 150
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 157, 108

Conread position: 8-217
Cow position:
Alignm length: 228
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 217

Conread position: 8-226
Cow position:
Alignm length: 220
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 121

Conread position: 8-317
Cow position:
Alignm length: 312
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 115

Conread position: 8-317
Cow position:
Alignm length: 313
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 117

Conread position: 8-456
Cow position:
Alignm length: 454
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 57

Conread position: 8-466
Cow position:
Alignm length: 461
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 106

Conread position: 8-466
Cow position:
Alignm length: 462
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-466
Cow position:
Alignm length: 462
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 22

Conread position: 8-466
Cow position:
Alignm length: 461
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 122

Conread position: 8-466
Cow position:
Alignm length: 461
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 121

Conread position: 8-466
Cow position:
Alignm length: 461
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 121

Conread position: 8-468
Cow position:
Alignm length: 461
Alignm identity: 308
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 84, 0

Conread position: 8-469
Cow position:
Alignm length: 467
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 121

Conread position: 8-477
Cow position:
Alignm length: 474
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-485
Cow position:
Alignm length: 503
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 199

Conread position: 8-486
Cow position:
Alignm length: 486
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-486
Cow position:
Alignm length: 516
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 211

Conread position: 8-486
Cow position:
Alignm length: 486
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-486
Cow position:
Alignm length: 485
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 121

Conread position: 8-486
Cow position:
Alignm length: 484
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-486
Cow position:
Alignm length: 504
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 117

Conread position: 8-486
Cow position:
Alignm length: 492
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 121

Conread position: 8-486
Cow position:
Alignm length: 484
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 37

Conread position: 8-487
Cow position:
Alignm length: 502
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 115

Conread position: 8-487
Cow position:
Alignm length: 485
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 449, 121

Conread position: 8-487
Cow position:
Alignm length: 489
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 121

Conread position: 8-489
Cow position:
Alignm length: 507
Alignm identity: 337
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 157, 85

Conread position: 8-489
Cow position:
Alignm length: 502
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 122

Conread position: 8-489
Cow position:
Alignm length: 507
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 118

Conread position: 8-489
Cow position:
Alignm length: 505
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 96

Conread position: 8-489
Cow position:
Alignm length: 490
Alignm identity: 316
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 171, 115

Conread position: 8-489
Cow position:
Alignm length: 498
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 115

Conread position: 8-489
Cow position:
Alignm length: 506
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 101

Conread position: 8-489
Cow position:
Alignm length: 507
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 118

Conread position: 8-489
Cow position:
Alignm length: 506
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 86

Conread position: 8-489
Cow position:
Alignm length: 506
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 116

Conread position: 8-491
Cow position:
Alignm length: 508
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 115

Conread position: 8-491
Cow position:
Alignm length: 506
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 106

Conread position: 8-492
Cow position:
Alignm length: 491
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 8-492
Cow position:
Alignm length: 491
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 62

Conread position: 8-492
Cow position:
Alignm length: 488
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 66

Conread position: 8-492
Cow position:
Alignm length: 487
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 74

Conread position: 8-492
Cow position:
Alignm length: 509
Alignm identity: 342
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 157, 101

Conread position: 8-492
Cow position:
Alignm length: 509
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 82

Conread position: 12-489
Cow position:
Alignm length: 501
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 88

Conread position: 12-492
Cow position:
Alignm length: 481
Alignm identity: 209
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 205, 0

Conread position: 15-486
Cow position:
Alignm length: 480
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 21

Conread position: 17-260
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 147, 8

Conread position: 21-385
Cow position:
Alignm length: 369
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 98

Conread position: 25-239
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 137, 70

Conread position: 27-490
Cow position:
Alignm length: 500
Alignm identity: 331
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 69, 104

Conread position: 59-486
Cow position:
Alignm length: 429
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 70

Conread position: 64-210
Cow position:
Alignm length: 149
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 70

Conread position: 64-424
Cow position:
Alignm length: 362
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 66

Conread position: 77-305
Cow position:
Alignm length: 231
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 81, 42

Conread position: 86-492
Cow position:
Alignm length: 416
Alignm identity: 289
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 76, 35

Conread position: 101-489
Cow position:
Alignm length: 405
Alignm identity: 263
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 64, 29

Conread position: 103-489
Cow position:
Alignm length: 391
Alignm identity: 245
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 10, 34

Conread position: 122-469
Cow position:
Alignm length: 352
Alignm identity: 241
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 40, 92

Conread position: 129-432
Cow position:
Alignm length: 308
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 66

Conread position: 129-476
Cow position:
Alignm length: 351
Alignm identity: 237
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 34, 76

Conread position: 169-470
Cow position:
Alignm length: 302
Alignm identity: 211
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 27, 0

Conread position: 174-486
Cow position:
Alignm length: 320
Alignm identity: 224
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 54, 39

Conread position: 183-489
Cow position:
Alignm length: 312
Alignm identity: 200
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 68, 29

Conread position: 183-489
Cow position:
Alignm length: 312
Alignm identity: 202
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 68, 29

Conread position: 192-489
Cow position:
Alignm length: 300
Alignm identity: 162
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 65, 105

Conread position: 207-489
Cow position:
Alignm length: 286
Alignm identity: 181
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 91

Conread position: 208-486
Cow position:
Alignm length: 281
Alignm identity: 195
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 261, 24

Conread position: 210-483
Cow position:
Alignm length: 275
Alignm identity: 203
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 110, 10

Conread position: 295-492
Cow position:
Alignm length: 198
Alignm identity: 147
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 109, 0

Conread position: 304-486
Cow position:
Alignm length: 188
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 124, 111

Conread position: 304-488
Cow position:
Alignm length: 186
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 170

Conread position: 335-466
Cow position:
Alignm length: 132
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 0

Show alignments to all cow chromosomes.