Cow genome map


           Conread name:
           Ss1.1-rpigcf0_021389.5
        

               Conread position:
               1-183
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               99, 127
               

               Conread position:
               1-186
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               12, 125
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               168
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               161, 126
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               12, 122
               

               Conread position:
               1-260
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               196
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               157, 126
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               198
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               255, 115
               

               Conread position:
               1-362
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 18
               

               Conread position:
               1-422
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 187
               

               Conread position:
               1-443
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 109
               

               Conread position:
               1-451
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               296
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               158, 11
               

               Conread position:
               1-460
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 17
               

               Conread position:
               1-464
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               309
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               98, 39
               

               Conread position:
               1-466
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 15
               

               Conread position:
               1-474
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               316
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               163, 92
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               329
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               28, 43
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               331
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               21, 88
               

               Conread position:
               1-492
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 17
               

               Conread position:
               1-492
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 17
               

               Conread position:
               1-492
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 57
               

               Conread position:
               1-492
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 12
               

               Conread position:
               2-199
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               14, 129
               

               Conread position:
               2-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               125, 10
               

               Conread position:
               2-217
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               167
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               98, 10
               

               Conread position:
               2-223
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               157, 43
               

               Conread position:
               2-474
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 37
               

               Conread position:
               2-486
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 10
               

               Conread position:
               2-486
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 7
               

               Conread position:
               2-486
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 127
               

               Conread position:
               2-486
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 10
               

               Conread position:
               3-207
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               160, 124
               

               Conread position:
               3-275
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               112, 122
               

               Conread position:
               3-472
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               310
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               160, 15
               

               Conread position:
               4-475
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               307
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               5, 92
               

               Conread position:
               4-492
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 126
               

               Conread position:
               6-210
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               77, 123
               

               Conread position:
               6-477
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 60
               

               Conread position:
               6-489
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               323
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               152, 93
               

               Conread position:
               7-466
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 122
               

               Conread position:
               7-492
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               336
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               158, 86
               

               Conread position:
               8-215
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               150, 117
               

               Conread position:
               8-260
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               150, 119
               

               Conread position:
               8-263
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               154, 121
               

               Conread position:
               8-317
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 118
               

               Conread position:
               8-351
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 122
               

               Conread position:
               8-418
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-424
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-452
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-466
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 122
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 121
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 104
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 51
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 122
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 121
               

               Conread position:
               8-487
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 115
               

               Conread position:
               8-487
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 115
               

               Conread position:
               8-487
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 17
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 115
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 115
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 117
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 99
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 115
               

               Conread position:
               8-492
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               433, 120
               

               Conread position:
               9-253
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               184
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               154, 44
               

               Conread position:
               9-473
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 121
               

               Conread position:
               12-198
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               94, 118
               

               Conread position:
               12-211
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               100, 189
               

               Conread position:
               12-396
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 131
               

               Conread position:
               12-458
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 98
               

               Conread position:
               12-461
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 11
               

               Conread position:
               12-488
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 114
               

               Conread position:
               12-492
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 85
               

               Conread position:
               13-226
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               83, 120
               

               Conread position:
               13-380
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               102, 77
               

               Conread position:
               13-382
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 19
               

               Conread position:
               15-474
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               309
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               346, 75
               

               Conread position:
               15-489
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 108
               

               Conread position:
               16-422
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               262
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               146, 46
               

               Conread position:
               19-492
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 111
               

               Conread position:
               29-479
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 67
               

               Conread position:
               32-492
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 15
               

               Conread position:
               38-260
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               124, 91
               

               Conread position:
               47-492
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 75
               

               Conread position:
               50-489
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 33
               

               Conread position:
               58-423
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               67-487
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               286
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               98, 56
               

               Conread position:
               67-489
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               298
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               98, 56
               

               Conread position:
               97-492
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 40
               

               Conread position:
               102-488
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 28
               

               Conread position:
               126-486
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               254
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               36, 82
               

               Conread position:
               132-474
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               30, 81
               

               Conread position:
               140-485
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               22, 75
               

               Conread position:
               140-489
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               25, 295
               

               Conread position:
               142-472
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 11
               

               Conread position:
               162-492
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               239
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               37, 119
               

               Conread position:
               168-486
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               70, 45
               

               Conread position:
               184-466
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               47, 29
               

               Conread position:
               239-423
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               173, 0
               

               Conread position:
               249-486
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               134, 50
               

               Conread position:
               251-489
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               13, 46
               

               Conread position:
               264-470
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               266-481
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               31, 21
               

               Conread position:
               267-477
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               30, 25
               

               Conread position:
               275-492
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               276-492
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               25, 20
               

               Conread position:
               280-460
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               304-468
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               59, 111
               

               Conread position:
               304-486
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               162, 89
               

               Conread position:
               305-487
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               319-492
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               156, 93
               
Show alignments to all cow chromosomes.