Cow genome map


           Conread name:
           Ss1.1-rpigcf0_021389.5
        

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               156, 88
               

               Conread position:
               1-219
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               158, 11
               

               Conread position:
               1-269
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               47, 81
               

               Conread position:
               1-275
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               162, 94
               

               Conread position:
               1-385
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               254
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               161, 84
               

               Conread position:
               1-402
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               156, 90
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 127
               

               Conread position:
               1-453
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 129
               

               Conread position:
               1-486
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 128
               

               Conread position:
               1-486
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 128
               

               Conread position:
               1-486
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               464, 128
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 123
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 128
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 25
               

               Conread position:
               1-492
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               327
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               12, 110
               

               Conread position:
               1-492
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 115
               

               Conread position:
               2-201
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               157
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               157, 10
               

               Conread position:
               2-211
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               56, 16
               

               Conread position:
               2-221
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               2-389
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               17, 123
               

               Conread position:
               2-454
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 10
               

               Conread position:
               2-456
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               309
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               160, 93
               

               Conread position:
               2-477
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               302
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               164, 14
               

               Conread position:
               2-486
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 10
               

               Conread position:
               2-486
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 10
               

               Conread position:
               2-492
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 10
               

               Conread position:
               2-492
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 14
               

               Conread position:
               3-226
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               3-237
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               25, 45
               

               Conread position:
               3-489
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               351, 97
               

               Conread position:
               4-216
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               159, 8
               

               Conread position:
               4-486
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 6
               

               Conread position:
               4-486
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 61
               

               Conread position:
               6-199
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               153
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               156, 120
               

               Conread position:
               6-260
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               215, 121
               

               Conread position:
               6-492
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 74
               

               Conread position:
               7-194
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               99, 108
               

               Conread position:
               7-317
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 99
               

               Conread position:
               7-486
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 5
               

               Conread position:
               8-193
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-204
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               157, 87
               

               Conread position:
               8-225
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               157, 117
               

               Conread position:
               8-225
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               157, 108
               

               Conread position:
               8-232
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               82, 99
               

               Conread position:
               8-260
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 117
               

               Conread position:
               8-317
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 118
               

               Conread position:
               8-325
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 119
               

               Conread position:
               8-410
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               297
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               96, 47
               

               Conread position:
               8-454
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-456
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-463
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 106
               

               Conread position:
               8-465
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 111
               

               Conread position:
               8-477
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-485
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 124
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 15
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 121
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-486
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 121
               

               Conread position:
               8-487
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 87
               

               Conread position:
               8-487
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 108
               

               Conread position:
               8-487
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 108
               

               Conread position:
               8-487
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 115
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 118
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 118
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 115
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 115
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 115
               

               Conread position:
               8-492
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               346
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               157, 107
               

               Conread position:
               8-492
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 115
               

               Conread position:
               8-492
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 121
               

               Conread position:
               8-492
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 27
               

               Conread position:
               9-298
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               148, 120
               

               Conread position:
               12-366
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 115
               

               Conread position:
               12-477
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               303
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               218, 77
               

               Conread position:
               12-489
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 111
               

               Conread position:
               15-465
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 50
               

               Conread position:
               15-492
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 30
               

               Conread position:
               16-456
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               47, 74
               

               Conread position:
               16-486
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 109
               

               Conread position:
               37-211
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               63, 91
               

               Conread position:
               37-492
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 93
               

               Conread position:
               49-478
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 80
               

               Conread position:
               64-468
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               173, 66
               

               Conread position:
               74-468
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               271
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               91, 56
               

               Conread position:
               86-476
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               76, 128
               

               Conread position:
               147-489
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               236
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               18, 165
               

               Conread position:
               183-489
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               68, 29
               

               Conread position:
               185-491
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               46, 28
               

               Conread position:
               194-474
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               38, 18
               

               Conread position:
               232-489
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               37, 14
               

               Conread position:
               236-418
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               241-486
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               224, 47
               

               Conread position:
               244-472
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               251-489
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               6, 46
               

               Conread position:
               295-489
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               304-455
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               27, 18
               

               Conread position:
               304-469
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               304-486
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               167, 111
               

               Conread position:
               304-486
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               161, 0
               
Show alignments to all cow chromosomes.