Cow genome map
| Conread name: | Ss1.1-rplac_18183.5 | 
| Conread position: | 37-443 | 
| Cow position: | chr3:17614422-17614828 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 18 | 
| Conread position: | 37-443 | 
| Cow position: | chr3:17624774-17624368 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 18 | 
| Conread position: | 54-438 | 
| Cow position: | chr3:62459271-62458887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 385 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 55-504 | 
| Cow position: | chr3:62478432-62477981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 381 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 431, 0 | 
| Conread position: | 56-436 | 
| Cow position: | chr3:1077454-1077833 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 198, 0 | 
| Conread position: | 56-506 | 
| Cow position: | chr3:62431043-62430593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 381 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 444, 391 | 
| Conread position: | 56-511 | 
| Cow position: | chr3:62448577-62449040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 388 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 384, 403 | 
| Conread position: | 57-442 | 
| Cow position: | chr3:17591905-17592290 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 57-509 | 
| Cow position: | chr3:17645420-17645888 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 378 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 391, 0 | 
| Conread position: | 305-437 | 
| Cow position: | chr3:56588624-56588754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 64, 0 | 
Show alignments to all cow chromosomes.
