Cow genome map
| Conread name: | Ss1.1-rpliv0109_k2.5 |
| Conread position: | 299-549 |
| Cow position: | chr1:94548470-94548220 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 22, 180 |
| Conread position: | 303-445 |
| Cow position: | chr1:9038005-9038152 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 305-551 |
| Cow position: | chr1:11188960-11189199 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 77, 155 |
| Conread position: | 308-455 |
| Cow position: | chr1:1055774-1055628 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 88, 65 |
| Conread position: | 308-455 |
| Cow position: | chr1:60002067-60002218 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 312-469 |
| Cow position: | chr1:61566783-61566940 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 312-551 |
| Cow position: | chr1:1917058-1917303 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 312-551 |
| Cow position: | chr1:13009947-13009708 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 74, 192 |
| Conread position: | 345-551 |
| Cow position: | chr1:660726-660929 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 79 |
Show alignments to all cow chromosomes.