Cow genome map


           Conread name:
           Ss1.1-rpliv0109_k2.5
        

               Conread position:
               299-511
               

               Cow position:
               chr2:81710570-81710369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               73, 96
               

               Conread position:
               305-515
               

               Cow position:
               chr2:77516101-77515888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               34, 137
               

               Conread position:
               308-476
               

               Cow position:
               chr2:37883073-37882899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               312-549
               

               Cow position:
               chr2:81468755-81468995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 111
               

               Conread position:
               312-551
               

               Cow position:
               chr2:15561669-15561425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               182
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               319-551
               

               Cow position:
               chr2:15813896-15814125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               180
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               68, 100
               

               Conread position:
               326-551
               

               Cow position:
               chr2:16010626-16010402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               401-546
               

               Cow position:
               chr2:39911319-39911464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.