Cow genome map


           Conread name:
           Ss1.1-rpliv0109_k2.5
        

               Conread position:
               303-551
               

               Cow position:
               chrX:15390647-15390409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               308-447
               

               Cow position:
               chrX:34817009-34817152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               308-455
               

               Cow position:
               chrX:8663284-8663133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               308-516
               

               Cow position:
               chrX:14280167-14279969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               308-549
               

               Cow position:
               chrX:15495746-15495508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               79, 30
               

               Conread position:
               309-447
               

               Cow position:
               chrX:34804355-34804496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               78, 134
               

               Conread position:
               342-504
               

               Cow position:
               chrX:28884859-28884694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               45, 129
               
Show alignments to all cow chromosomes.