Cow genome map
| Conread name: | Ss1.1-rpliv0124_d2.5 |
| Conread position: | 1-287 |
| Cow position: | chr10:9010146-9009860 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 142, 119 |
| Conread position: | 2-337 |
| Cow position: | chr10:8996333-8995997 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 327, 0 |
| Conread position: | 2-367 |
| Cow position: | chr10:9010397-9010032 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 133, 139 |
| Conread position: | 2-399 |
| Cow position: | chr10:9010229-9009832 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 301, 306 |
| Conread position: | 2-411 |
| Cow position: | chr10:8996417-8996008 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 265 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 55, 44 |
| Conread position: | 2-414 |
| Cow position: | chr10:9010481-9010069 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 259 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 55, 42 |
| Conread position: | 2-419 |
| Cow position: | chr10:8996753-8996337 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 216 |
| Conread position: | 6-414 |
| Cow position: | chr10:8996497-8996089 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 259 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-414 |
| Cow position: | chr10:8996833-8996425 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 135 |
| Conread position: | 14-386 |
| Cow position: | chr10:21939057-21938687 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 16, 6 |
| Conread position: | 14-410 |
| Cow position: | chr10:9031268-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-414 |
| Cow position: | chr10:8996657-8996257 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 253 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-414 |
| Cow position: | chr10:9010301-9009901 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-427 |
| Cow position: | chr10:8996573-8996160 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 265 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 43, 36 |
| Conread position: | 15-384 |
| Cow position: | chr10:21939140-21938771 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 18, 28 |
| Conread position: | 58-414 |
| Cow position: | chr10:9031228-9031584 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 87, 96 |
| Conread position: | 72-414 |
| Cow position: | chr10:8996851-8996509 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.