Cow genome map


           Conread name:
           Ss1.1-rpliv0124_d2.5
        

               Conread position:
               1-414
               

               Cow position:
               chr11:74555013-74554600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-335
               

               Cow position:
               chr11:74554504-74554175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-399
               

               Cow position:
               chr11:74555091-74554699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               251
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-396
               

               Cow position:
               chr11:74554838-74554450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               258
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               137, 146
               

               Conread position:
               9-413
               

               Cow position:
               chr11:74554671-74554265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 147
               

               Conread position:
               14-414
               

               Cow position:
               chr11:74554916-74554516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               295, 284
               

               Conread position:
               17-414
               

               Cow position:
               chr11:74554577-74554180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 286
               

               Conread position:
               70-414
               

               Cow position:
               chr11:74555111-74554768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               62, 6
               
Show alignments to all cow chromosomes.