Cow genome map
| Conread name: | Ss1.1-rpliv0124_d2.5 |
| Conread position: | 1-162 |
| Cow position: | chr14:25837065-25837226 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-265 |
| Cow position: | chr14:25860538-25860802 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-358 |
| Cow position: | chr14:25795424-25795067 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 129, 117 |
| Conread position: | 1-369 |
| Cow position: | chr14:25877505-25877873 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 45 |
| Conread position: | 1-396 |
| Cow position: | chr14:25859698-25860093 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 296 |
| Conread position: | 1-397 |
| Cow position: | chr14:3156328-3156715 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 1-414 |
| Cow position: | chr14:25794584-25794170 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 246, 0 |
| Conread position: | 1-414 |
| Cow position: | chr14:25794920-25794507 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 263 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 39, 22 |
| Conread position: | 1-414 |
| Cow position: | chr14:25836561-25836974 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-414 |
| Cow position: | chr14:25859866-25860279 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 144 |
| Conread position: | 1-414 |
| Cow position: | chr14:25860202-25860615 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-414 |
| Cow position: | chr14:25876917-25877330 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 399, 394 |
| Conread position: | 1-414 |
| Cow position: | chr14:25877001-25877414 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 62 |
| Conread position: | 1-414 |
| Cow position: | chr14:25877253-25877666 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-419 |
| Cow position: | chr14:3155908-3156325 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 272 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 40, 23 |
| Conread position: | 1-423 |
| Cow position: | chr14:3155419-3155841 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 211 |
| Conread position: | 1-427 |
| Cow position: | chr14:25877337-25877763 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 392, 384 |
| Conread position: | 2-357 |
| Cow position: | chr14:447768-448123 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 45, 51 |
| Conread position: | 2-368 |
| Cow position: | chr14:680906-681272 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-368 |
| Cow position: | chr14:3061730-3061364 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 139, 128 |
| Conread position: | 2-378 |
| Cow position: | chr14:3127675-3127299 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 222, 188 |
| Conread position: | 2-380 |
| Cow position: | chr14:3080079-3079701 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 247 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 55, 48 |
| Conread position: | 2-397 |
| Cow position: | chr14:25895293-25895688 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-400 |
| Cow position: | chr14:25784279-25784677 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 250 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-411 |
| Cow position: | chr14:25783523-25783932 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-414 |
| Cow position: | chr14:25783691-25784103 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 265 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 127, 139 |
| Conread position: | 2-414 |
| Cow position: | chr14:25784027-25784439 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 266 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 146, 141 |
| Conread position: | 2-414 |
| Cow position: | chr14:25784195-25784607 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 203 |
| Conread position: | 2-414 |
| Cow position: | chr14:25794751-25794339 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 204, 212 |
| Conread position: | 2-414 |
| Cow position: | chr14:25795339-25794927 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 271, 291 |
| Conread position: | 2-414 |
| Cow position: | chr14:25836058-25836470 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-414 |
| Cow position: | chr14:25836142-25836554 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-414 |
| Cow position: | chr14:25836310-25836722 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-414 |
| Cow position: | chr14:25836478-25836890 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-414 |
| Cow position: | chr14:25836730-25837142 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 150 |
| Conread position: | 2-414 |
| Cow position: | chr14:25859363-25859775 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 138 |
| Conread position: | 2-414 |
| Cow position: | chr14:25859783-25860195 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-414 |
| Cow position: | chr14:25860035-25860447 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 134 |
| Conread position: | 2-414 |
| Cow position: | chr14:25877086-25877498 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 134 |
| Conread position: | 2-414 |
| Cow position: | chr14:25895377-25895789 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 385, 391 |
| Conread position: | 2-419 |
| Cow position: | chr14:3080247-3079831 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 68 |
| Conread position: | 2-419 |
| Cow position: | chr14:3101325-3100912 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 134, 118 |
| Conread position: | 2-426 |
| Cow position: | chr14:25835806-25836230 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-427 |
| Cow position: | chr14:25860287-25860712 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 379, 391 |
| Conread position: | 2-732 |
| Cow position: | chr14:25836814-25837530 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 627 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 543, 0 |
| Conread position: | 3-411 |
| Cow position: | chr14:25794666-25794257 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 247 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 326, 0 |
| Conread position: | 3-411 |
| Cow position: | chr14:25794834-25794426 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 191, 207 |
| Conread position: | 3-414 |
| Cow position: | chr14:25910763-25911170 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 4-414 |
| Cow position: | chr14:25859448-25859859 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 365 |
| Conread position: | 6-369 |
| Cow position: | chr14:3127755-3127392 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 219, 212 |
| Conread position: | 6-378 |
| Cow position: | chr14:3080579-3080207 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 248 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 49, 41 |
| Conread position: | 6-413 |
| Cow position: | chr14:3156081-3156488 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 50, 41 |
| Conread position: | 6-414 |
| Cow position: | chr14:680406-680814 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 218, 206 |
| Conread position: | 6-414 |
| Cow position: | chr14:3128091-3127683 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 253 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-414 |
| Cow position: | chr14:25860123-25860531 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-414 |
| Cow position: | chr14:25895213-25895621 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-414 |
| Cow position: | chr14:25895885-25896293 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-415 |
| Cow position: | chr14:25896053-25896459 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 303 |
| Conread position: | 6-427 |
| Cow position: | chr14:25895129-25895550 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 40 |
| Conread position: | 7-200 |
| Cow position: | chr14:25911099-25911292 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-387 |
| Cow position: | chr14:680239-680619 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 247 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 62, 56 |
| Conread position: | 7-414 |
| Cow position: | chr14:25876335-25876742 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-414 |
| Cow position: | chr14:25876419-25876826 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 383, 378 |
| Conread position: | 7-414 |
| Cow position: | chr14:25894962-25895369 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 6 |
| Conread position: | 7-414 |
| Cow position: | chr14:25895046-25895453 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 122 |
| Conread position: | 7-427 |
| Cow position: | chr14:3080830-3080410 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 37 |
| Conread position: | 7-427 |
| Cow position: | chr14:25895634-25896054 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 372, 378 |
| Conread position: | 8-202 |
| Cow position: | chr14:25877680-25877874 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-349 |
| Cow position: | chr14:25860461-25860802 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 38 |
| Conread position: | 8-396 |
| Cow position: | chr14:25876756-25877144 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-405 |
| Cow position: | chr14:25895803-25896200 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-412 |
| Cow position: | chr14:25783445-25783849 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 206, 197 |
| Conread position: | 8-414 |
| Cow position: | chr14:25795165-25794759 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 100, 133 |
| Conread position: | 8-414 |
| Cow position: | chr14:25836232-25836638 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-414 |
| Cow position: | chr14:25859537-25859943 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 132 |
| Conread position: | 8-414 |
| Cow position: | chr14:25859957-25860363 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-414 |
| Cow position: | chr14:25876504-25876910 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-414 |
| Cow position: | chr14:25876588-25876994 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-414 |
| Cow position: | chr14:25876672-25877078 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-414 |
| Cow position: | chr14:25876840-25877246 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-414 |
| Cow position: | chr14:25910848-25911254 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 28 |
| Conread position: | 8-415 |
| Cow position: | chr14:25860377-25860784 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 120 |
| Conread position: | 8-415 |
| Cow position: | chr14:25877428-25877835 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 120 |
| Conread position: | 13-321 |
| Cow position: | chr14:447947-448255 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 43, 31 |
| Conread position: | 14-344 |
| Cow position: | chr14:25910362-25910691 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 127, 75 |
| Conread position: | 14-368 |
| Cow position: | chr14:3127999-3127645 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 43, 30 |
| Conread position: | 14-369 |
| Cow position: | chr14:680498-680853 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 116, 136 |
| Conread position: | 14-379 |
| Cow position: | chr14:25835650-25836015 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 236 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-380 |
| Cow position: | chr14:680834-681200 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 42, 30 |
| Conread position: | 14-391 |
| Cow position: | chr14:3100730-3100352 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 339, 334 |
| Conread position: | 14-397 |
| Cow position: | chr14:3127831-3127448 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 250 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 43, 31 |
| Conread position: | 14-405 |
| Cow position: | chr14:25835734-25836125 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-407 |
| Cow position: | chr14:447864-448257 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 43, 33 |
| Conread position: | 14-411 |
| Cow position: | chr14:3080151-3079754 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 258 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 43, 30 |
| Conread position: | 14-414 |
| Cow position: | chr14:447612-448012 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 259 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 33, 46 |
| Conread position: | 14-414 |
| Cow position: | chr14:447696-448096 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 260 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 39, 29 |
| Conread position: | 14-414 |
| Cow position: | chr14:680750-681150 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 43, 36 |
| Conread position: | 14-414 |
| Cow position: | chr14:3061550-3061150 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 274, 295 |
| Conread position: | 14-414 |
| Cow position: | chr14:3080739-3080339 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 260 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 43, 30 |
| Conread position: | 14-414 |
| Cow position: | chr14:3080991-3080591 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-414 |
| Cow position: | chr14:25783367-25783767 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 255 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 18, 12 |
| Conread position: | 14-414 |
| Cow position: | chr14:25783955-25784355 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 257 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-414 |
| Cow position: | chr14:25835986-25836386 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-414 |
| Cow position: | chr14:25836406-25836806 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-414 |
| Cow position: | chr14:25859291-25859691 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 56 |
| Conread position: | 14-414 |
| Cow position: | chr14:25877182-25877582 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-414 |
| Cow position: | chr14:25895473-25895873 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 203 |
| Conread position: | 14-422 |
| Cow position: | chr14:680582-680989 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 39, 30 |
| Conread position: | 14-427 |
| Cow position: | chr14:3127915-3127502 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 261 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 42, 30 |
| Conread position: | 15-411 |
| Cow position: | chr14:3156006-3156402 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 107, 101 |
| Conread position: | 16-371 |
| Cow position: | chr14:25910940-25911295 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 134 |
| Conread position: | 16-411 |
| Cow position: | chr14:25895979-25896374 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 112 |
| Conread position: | 17-378 |
| Cow position: | chr14:3080652-3080291 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 235 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-414 |
| Cow position: | chr14:25783874-25784271 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 253 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 197, 188 |
| Conread position: | 17-414 |
| Cow position: | chr14:25836661-25837058 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-414 |
| Cow position: | chr14:25895560-25895957 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-414 |
| Cow position: | chr14:25895728-25896125 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 23-414 |
| Cow position: | chr14:25835911-25836302 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 39-405 |
| Cow position: | chr14:25894829-25895192 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 339, 90 |
| Conread position: | 48-368 |
| Cow position: | chr14:25894919-25895239 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 55-414 |
| Cow position: | chr14:25795034-25794675 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 96, 79 |
| Conread position: | 56-380 |
| Cow position: | chr14:447570-447894 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 243, 249 |
| Conread position: | 56-414 |
| Cow position: | chr14:680204-680562 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 13, 6 |
| Conread position: | 56-414 |
| Cow position: | chr14:25876300-25876658 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 238 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 107, 121 |
| Conread position: | 67-414 |
| Cow position: | chr14:25859680-25860027 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 303, 322 |
| Conread position: | 68-386 |
| Cow position: | chr14:25859177-25859495 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 217 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 57, 44 |
| Conread position: | 68-414 |
| Cow position: | chr14:25859261-25859607 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 233 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 310, 302 |
| Conread position: | 74-369 |
| Cow position: | chr14:3155408-3155703 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 91-414 |
| Cow position: | chr14:25910522-25910834 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 211, 0 |
| Conread position: | 95-414 |
| Cow position: | chr14:25835647-25835966 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 292, 297 |
| Conread position: | 149-397 |
| Cow position: | chr14:420633-420881 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 152-405 |
| Cow position: | chr14:25876228-25876481 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 72, 50 |
| Conread position: | 152-414 |
| Cow position: | chr14:447582-447844 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 60, 74 |
| Conread position: | 152-427 |
| Cow position: | chr14:3128113-3127838 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 158-405 |
| Cow position: | chr14:680222-680469 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 158-419 |
| Cow position: | chr14:3155408-3155668 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 258, 0 |
| Conread position: | 160-414 |
| Cow position: | chr14:25783345-25783599 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 40, 35 |
| Conread position: | 162-414 |
| Cow position: | chr14:3155331-3155580 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 167-419 |
| Cow position: | chr14:447513-447764 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 249, 0 |
Show alignments to all cow chromosomes.