Cow genome map


           Conread name:
           Ss1.1-rpliv0124_d2.5
        

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               277, 281
               

               Conread position:
               2-366
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               230
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               2-410
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               262
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               55, 45
               

               Conread position:
               2-414
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               265
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               222, 215
               

               Conread position:
               2-414
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 45
               

               Conread position:
               2-414
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               261
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-369
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               34, 18
               

               Conread position:
               6-414
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 211
               

               Conread position:
               8-378
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               246
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               216, 209
               

               Conread position:
               8-414
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               261
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-368
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               10, 38
               

               Conread position:
               13-344
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               132, 140
               

               Conread position:
               14-379
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               228
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               105, 91
               

               Conread position:
               14-397
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-400
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               189, 147
               

               Conread position:
               14-411
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               174, 193
               

               Conread position:
               14-414
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               259
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               42, 33
               

               Conread position:
               15-360
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               17-396
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               309, 0
               

               Conread position:
               57-335
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               88, 44
               

               Conread position:
               67-411
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               30, 5
               

               Conread position:
               68-367
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               75, 93
               

               Conread position:
               152-414
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               185-426
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.