Cow genome map
| Conread name: | Ss1.1-rpliv0124_d2.5 |
| Conread position: | 1-326 |
| Cow position: | chr2:82800123-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 277, 281 |
| Conread position: | 2-366 |
| Cow position: | chr2:86465528-86465892 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 40, 33 |
| Conread position: | 2-410 |
| Cow position: | chr2:82800040-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 262 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 55, 45 |
| Conread position: | 2-414 |
| Cow position: | chr2:82799536-82799948 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 265 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 222, 215 |
| Conread position: | 2-414 |
| Cow position: | chr2:82799620-82800032 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 45 |
| Conread position: | 2-414 |
| Cow position: | chr2:82799872-82800284 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 261 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-369 |
| Cow position: | chr2:86465364-86465727 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 18 |
| Conread position: | 6-414 |
| Cow position: | chr2:82799792-82800200 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 211 |
| Conread position: | 8-378 |
| Cow position: | chr2:82799458-82799828 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 246 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 216, 209 |
| Conread position: | 8-414 |
| Cow position: | chr2:82799962-82800368 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 261 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-368 |
| Cow position: | chr2:48689526-48689166 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 10, 38 |
| Conread position: | 13-344 |
| Cow position: | chr2:78755689-78756020 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 132, 140 |
| Conread position: | 14-379 |
| Cow position: | chr2:78754450-78754811 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 105, 91 |
| Conread position: | 14-397 |
| Cow position: | chr2:78754854-78755237 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-400 |
| Cow position: | chr2:78755190-78755574 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 189, 147 |
| Conread position: | 14-411 |
| Cow position: | chr2:78754938-78755335 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 174, 193 |
| Conread position: | 14-414 |
| Cow position: | chr2:82799716-82800116 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 259 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 42, 33 |
| Conread position: | 15-360 |
| Cow position: | chr2:86465289-86465634 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 103, 95 |
| Conread position: | 17-396 |
| Cow position: | chr2:78755025-78755403 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 309, 0 |
| Conread position: | 57-335 |
| Cow position: | chr2:78756070-78756346 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 88, 44 |
| Conread position: | 67-411 |
| Cow position: | chr2:48689550-48689207 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 30, 5 |
| Conread position: | 68-367 |
| Cow position: | chr2:86465174-86465473 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 93 |
| Conread position: | 152-414 |
| Cow position: | chr2:78754824-78755086 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-426 |
| Cow position: | chr2:82799467-82799708 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.