Cow genome map
| Conread name: | Ss1.1-rpliv0124_d2.5 |
| Conread position: | 1-335 |
| Cow position: | chr21:34222875-34222541 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 224 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 312, 318 |
| Conread position: | 1-414 |
| Cow position: | chr21:34223043-34222630 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 59 |
| Conread position: | 2-378 |
| Cow position: | chr21:12608752-12608376 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 239 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 11, 15 |
| Conread position: | 2-386 |
| Cow position: | chr21:34222958-34222574 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 42 |
| Conread position: | 2-405 |
| Cow position: | chr21:12608500-12608097 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 252 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 151, 141 |
| Conread position: | 2-414 |
| Cow position: | chr21:12608836-12608424 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-368 |
| Cow position: | chr21:12608412-12608050 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 194, 219 |
| Conread position: | 6-399 |
| Cow position: | chr21:12659350-12659743 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 254 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-427 |
| Cow position: | chr21:12659518-12659939 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 38 |
| Conread position: | 7-397 |
| Cow position: | chr21:12608915-12608525 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 214, 205 |
| Conread position: | 7-397 |
| Cow position: | chr21:12659183-12659573 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 50, 37 |
| Conread position: | 14-427 |
| Cow position: | chr21:12658938-12659351 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 265 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 43, 30 |
| Conread position: | 14-427 |
| Cow position: | chr21:12659274-12659687 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 265 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 36, 46 |
| Conread position: | 15-414 |
| Cow position: | chr21:12608571-12608172 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 40, 29 |
| Conread position: | 16-400 |
| Cow position: | chr21:12659612-12659996 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 56-314 |
| Cow position: | chr21:12608194-12607936 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 56-378 |
| Cow position: | chr21:34223072-34222750 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 179, 160 |
| Conread position: | 56-414 |
| Cow position: | chr21:34223153-34222798 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 260, 89 |
| Conread position: | 185-414 |
| Cow position: | chr21:12608905-12608676 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.