Cow genome map

Conread name: Ss1.1-rpliv0124_d2.5

Conread position: 1-230
Cow position:
Alignm length: 230
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-335
Cow position:
Alignm length: 335
Alignm identity: 216
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 1-353
Cow position:
Alignm length: 354
Alignm identity: 236
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 55, 44

Conread position: 1-410
Cow position:
Alignm length: 411
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 189

Conread position: 1-414
Cow position:
Alignm length: 414
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-414
Cow position:
Alignm length: 418
Alignm identity: 261
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 52, 44

Conread position: 1-414
Cow position:
Alignm length: 414
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-414
Cow position:
Alignm length: 416
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 119

Conread position: 2-263
Cow position:
Alignm length: 262
Alignm identity: 165
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 2-333
Cow position:
Alignm length: 333
Alignm identity: 218
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 143, 152

Conread position: 2-334
Cow position:
Alignm length: 335
Alignm identity: 211
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 61, 67

Conread position: 2-341
Cow position:
Alignm length: 341
Alignm identity: 223
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 306, 300

Conread position: 2-346
Cow position:
Alignm length: 348
Alignm identity: 216
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 222, 205

Conread position: 2-370
Cow position:
Alignm length: 370
Alignm identity: 232
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 315, 320

Conread position: 2-370
Cow position:
Alignm length: 371
Alignm identity: 243
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 223, 216

Conread position: 2-405
Cow position:
Alignm length: 405
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 43

Conread position: 2-405
Cow position:
Alignm length: 407
Alignm identity: 252
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 140, 124

Conread position: 2-406
Cow position:
Alignm length: 405
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 2-413
Cow position:
Alignm length: 413
Alignm identity: 259
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 62, 41

Conread position: 2-414
Cow position:
Alignm length: 413
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-414
Cow position:
Alignm length: 413
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-414
Cow position:
Alignm length: 414
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 44

Conread position: 2-414
Cow position:
Alignm length: 413
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-414
Cow position:
Alignm length: 416
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 79

Conread position: 2-414
Cow position:
Alignm length: 414
Alignm identity: 259
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 312, 317

Conread position: 2-414
Cow position:
Alignm length: 414
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 75

Conread position: 2-432
Cow position:
Alignm length: 432
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 423, 0

Conread position: 3-405
Cow position:
Alignm length: 403
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-414
Cow position:
Alignm length: 413
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 300

Conread position: 3-414
Cow position:
Alignm length: 414
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 124

Conread position: 3-414
Cow position:
Alignm length: 415
Alignm identity: 259
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 29, 39

Conread position: 4-322
Cow position:
Alignm length: 322
Alignm identity: 198
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 46

Conread position: 5-414
Cow position:
Alignm length: 411
Alignm identity: 251
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 18, 56

Conread position: 6-400
Cow position:
Alignm length: 395
Alignm identity: 244
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 8-411
Cow position:
Alignm length: 406
Alignm identity: 254
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 115, 145

Conread position: 13-260
Cow position:
Alignm length: 249
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 135, 130

Conread position: 13-405
Cow position:
Alignm length: 394
Alignm identity: 237
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 390, 386

Conread position: 14-414
Cow position:
Alignm length: 401
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 14-414
Cow position:
Alignm length: 404
Alignm identity: 264
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 42, 35

Conread position: 17-414
Cow position:
Alignm length: 399
Alignm identity: 255
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 46, 64

Conread position: 56-414
Cow position:
Alignm length: 359
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 66-406
Cow position:
Alignm length: 343
Alignm identity: 228
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 14, 0

Conread position: 67-405
Cow position:
Alignm length: 339
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 67-414
Cow position:
Alignm length: 349
Alignm identity: 233
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 242, 22

Conread position: 68-414
Cow position:
Alignm length: 348
Alignm identity: 220
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 331, 337

Conread position: 70-414
Cow position:
Alignm length: 346
Alignm identity: 226
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 239, 232

Conread position: 70-421
Cow position:
Alignm length: 353
Alignm identity: 231
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 245, 241

Conread position: 72-414
Cow position:
Alignm length: 344
Alignm identity: 222
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 150, 141

Conread position: 147-414
Cow position:
Alignm length: 270
Alignm identity: 185
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 17, 0

Conread position: 150-427
Cow position:
Alignm length: 278
Alignm identity: 180
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 156-405
Cow position:
Alignm length: 251
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 211, 0

Conread position: 156-414
Cow position:
Alignm length: 259
Alignm identity: 163
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 176-414
Cow position:
Alignm length: 240
Alignm identity: 166
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 28, 15

Show alignments to all cow chromosomes.