Cow genome map

Conread name: Ss1.1-rpliv0124_d2.5

Conread position: 1-397
Cow position:
Alignm length: 398
Alignm identity: 251
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 221, 213

Conread position: 2-237
Cow position:
Alignm length: 236
Alignm identity: 161
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 2-323
Cow position:
Alignm length: 323
Alignm identity: 195
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 128, 136

Conread position: 2-345
Cow position:
Alignm length: 344
Alignm identity: 207
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-369
Cow position:
Alignm length: 370
Alignm identity: 240
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 151, 143

Conread position: 2-397
Cow position:
Alignm length: 396
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-397
Cow position:
Alignm length: 397
Alignm identity: 239
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 26

Conread position: 2-400
Cow position:
Alignm length: 401
Alignm identity: 245
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 283, 307

Conread position: 2-405
Cow position:
Alignm length: 404
Alignm identity: 258
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 2-414
Cow position:
Alignm length: 413
Alignm identity: 244
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 170, 0

Conread position: 2-414
Cow position:
Alignm length: 413
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-414
Cow position:
Alignm length: 415
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 68

Conread position: 3-400
Cow position:
Alignm length: 399
Alignm identity: 220
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 127, 138

Conread position: 4-397
Cow position:
Alignm length: 394
Alignm identity: 243
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 6-323
Cow position:
Alignm length: 319
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 125

Conread position: 6-336
Cow position:
Alignm length: 335
Alignm identity: 220
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 50, 38

Conread position: 6-367
Cow position:
Alignm length: 362
Alignm identity: 219
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 6-405
Cow position:
Alignm length: 400
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-396
Cow position:
Alignm length: 391
Alignm identity: 247
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 49, 38

Conread position: 8-393
Cow position:
Alignm length: 387
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 60

Conread position: 8-414
Cow position:
Alignm length: 408
Alignm identity: 255
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 137, 69

Conread position: 14-250
Cow position:
Alignm length: 239
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 131, 139

Conread position: 14-360
Cow position:
Alignm length: 348
Alignm identity: 212
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 268, 262

Conread position: 14-414
Cow position:
Alignm length: 404
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 33

Conread position: 15-419
Cow position:
Alignm length: 405
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 401, 0

Conread position: 16-414
Cow position:
Alignm length: 400
Alignm identity: 251
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 116, 125

Conread position: 39-414
Cow position:
Alignm length: 376
Alignm identity: 233
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 48-414
Cow position:
Alignm length: 368
Alignm identity: 235
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 339, 9

Conread position: 56-334
Cow position:
Alignm length: 279
Alignm identity: 185
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 56-367
Cow position:
Alignm length: 312
Alignm identity: 195
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 56-367
Cow position:
Alignm length: 314
Alignm identity: 201
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 168, 157

Conread position: 56-405
Cow position:
Alignm length: 356
Alignm identity: 225
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 73, 60

Conread position: 56-414
Cow position:
Alignm length: 359
Alignm identity: 218
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 68-360
Cow position:
Alignm length: 294
Alignm identity: 186
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 61, 72

Conread position: 68-400
Cow position:
Alignm length: 333
Alignm identity: 207
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 74-414
Cow position:
Alignm length: 341
Alignm identity: 213
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 78-414
Cow position:
Alignm length: 337
Alignm identity: 220
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 161-414
Cow position:
Alignm length: 254
Alignm identity: 172
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 246-427
Cow position:
Alignm length: 184
Alignm identity: 132
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 62, 41

Show alignments to all cow chromosomes.