Cow genome map
| Conread name: | Ss1.1-rpliv0124_d2.5 |
| Conread position: | 1-427 |
| Cow position: | chr3:62722065-62721639 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 276 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 56, 50 |
| Conread position: | 2-414 |
| Cow position: | chr3:62722148-62721736 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 55, 49 |
| Conread position: | 4-414 |
| Cow position: | chr3:68045695-68046106 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 255 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 5, 209 |
| Conread position: | 7-367 |
| Cow position: | chr3:20194904-20195264 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 217, 205 |
| Conread position: | 8-411 |
| Cow position: | chr3:68045784-68046187 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-369 |
| Cow position: | chr3:68045958-68046313 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-414 |
| Cow position: | chr3:62722220-62721820 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 127, 122 |
| Conread position: | 14-414 |
| Cow position: | chr3:62722304-62721904 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 256 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 294, 288 |
| Conread position: | 14-419 |
| Cow position: | chr3:62743034-62743434 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 56-294 |
| Cow position: | chr3:68027491-68027729 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 76, 85 |
| Conread position: | 68-369 |
| Cow position: | chr3:68045676-68045977 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 240, 226 |
| Conread position: | 69-414 |
| Cow position: | chr3:68045593-68045938 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 57, 72 |
| Conread position: | 79-409 |
| Cow position: | chr3:62722323-62721993 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 230, 224 |
| Conread position: | 83-414 |
| Cow position: | chr3:20194728-20195059 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 152-387 |
| Cow position: | chr3:68027503-68027738 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 152-407 |
| Cow position: | chr3:68027083-68027338 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 175-414 |
| Cow position: | chr3:62722311-62722072 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-369 |
| Cow position: | chr3:68027032-68027216 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.