Cow genome map

Conread name: Ss1.1-rpliv0124_d2.5

Conread position: 1-166
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 2-261
Cow position:
Alignm length: 262
Alignm identity: 190
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 250, 0

Conread position: 2-360
Cow position:
Alignm length: 359
Alignm identity: 216
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-400
Cow position:
Alignm length: 399
Alignm identity: 252
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 2-414
Cow position:
Alignm length: 413
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 0

Conread position: 2-414
Cow position:
Alignm length: 413
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-415
Cow position:
Alignm length: 415
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 11

Conread position: 3-414
Cow position:
Alignm length: 412
Alignm identity: 263
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 340, 0

Conread position: 6-286
Cow position:
Alignm length: 282
Alignm identity: 194
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 48, 44

Conread position: 6-406
Cow position:
Alignm length: 401
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 0

Conread position: 6-411
Cow position:
Alignm length: 406
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-414
Cow position:
Alignm length: 410
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 64

Conread position: 6-414
Cow position:
Alignm length: 411
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 40

Conread position: 6-419
Cow position:
Alignm length: 415
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 374

Conread position: 6-427
Cow position:
Alignm length: 423
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 374

Conread position: 8-363
Cow position:
Alignm length: 356
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 8-414
Cow position:
Alignm length: 407
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 8-425
Cow position:
Alignm length: 418
Alignm identity: 265
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 129, 0

Conread position: 13-397
Cow position:
Alignm length: 385
Alignm identity: 238
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 289, 0

Conread position: 13-414
Cow position:
Alignm length: 405
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 131

Conread position: 14-397
Cow position:
Alignm length: 384
Alignm identity: 245
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 14-414
Cow position:
Alignm length: 402
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 30

Conread position: 14-414
Cow position:
Alignm length: 403
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 56

Conread position: 14-427
Cow position:
Alignm length: 414
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 15-378
Cow position:
Alignm length: 365
Alignm identity: 235
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 267, 258

Conread position: 15-414
Cow position:
Alignm length: 401
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 258

Conread position: 15-414
Cow position:
Alignm length: 401
Alignm identity: 258
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 15, 8

Conread position: 15-414
Cow position:
Alignm length: 400
Alignm identity: 256
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 16-405
Cow position:
Alignm length: 390
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 16-428
Cow position:
Alignm length: 414
Alignm identity: 253
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 43, 35

Conread position: 17-385
Cow position:
Alignm length: 369
Alignm identity: 239
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 329, 0

Conread position: 17-405
Cow position:
Alignm length: 389
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 17-405
Cow position:
Alignm length: 389
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 17-414
Cow position:
Alignm length: 399
Alignm identity: 259
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 367, 360

Conread position: 21-414
Cow position:
Alignm length: 395
Alignm identity: 255
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 12, 0

Conread position: 37-358
Cow position:
Alignm length: 326
Alignm identity: 204
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 243, 0

Conread position: 41-405
Cow position:
Alignm length: 365
Alignm identity: 226
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 49-405
Cow position:
Alignm length: 360
Alignm identity: 221
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 20, 16

Conread position: 63-368
Cow position:
Alignm length: 307
Alignm identity: 202
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 17, 0

Conread position: 67-367
Cow position:
Alignm length: 301
Alignm identity: 199
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 67-393
Cow position:
Alignm length: 328
Alignm identity: 201
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 220, 232

Conread position: 76-414
Cow position:
Alignm length: 339
Alignm identity: 222
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 146-427
Cow position:
Alignm length: 283
Alignm identity: 184
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 254, 249

Conread position: 160-427
Cow position:
Alignm length: 269
Alignm identity: 179
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 224, 219

Conread position: 203-414
Cow position:
Alignm length: 212
Alignm identity: 141
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.