Cow genome map

Conread name: Ss1.1-rpliv0124_d2.5

Conread position: 1-414
Cow position: chr8:45201362-45201775 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 263
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 56, 45

Conread position: 1-414
Cow position: chr8:46816137-46816550 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 255
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 2-393
Cow position: chr8:45201615-45202006 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 244
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 2-405
Cow position: chr8:48407201-48406798 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-408
Cow position: chr8:48406697-48406291 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 379

Conread position: 2-409
Cow position: chr8:46816894-46817301 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 254
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 222, 213

Conread position: 2-413
Cow position: chr8:55581083-55581494 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 257
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 2-414
Cow position: chr8:45201111-45201523 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 250
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 2-414
Cow position: chr8:45201447-45201859 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 259
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 52, 48

Conread position: 2-414
Cow position: chr8:48406949-48406537 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 266
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 210, 199

Conread position: 2-414
Cow position: chr8:48407453-48407041 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-420
Cow position: chr8:55581251-55581668 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 264
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 198, 207

Conread position: 3-333
Cow position: chr8:48407116-48406786 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 212
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position: chr8:48407284-48406917 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 236
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 3-414
Cow position: chr8:48407620-48407209 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 258
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 40, 20

Conread position: 3-415
Cow position: chr8:48406864-48406452 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 247
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 102, 110

Conread position: 5-414
Cow position: chr8:48407534-48407125 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 256
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 6-414
Cow position: chr8:55581003-55581411 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 262
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 8-331
Cow position: chr8:46817068-46817391 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 195
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 8-414
Cow position: chr8:46816312-46816718 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 250
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 108, 118

Conread position: 8-414
Cow position: chr8:46816816-46817222 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 254
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 24, 15

Conread position: 8-414
Cow position: chr8:55580919-55581327 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 266
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 43

Conread position: 14-414
Cow position: chr8:45201207-45201607 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 244
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 14-414
Cow position: chr8:46816066-46816466 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 253
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 14-414
Cow position: chr8:46816486-46816886 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 250
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 41, 35

Conread position: 14-414
Cow position: chr8:46816570-46816970 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 258
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 391, 386

Conread position: 14-414
Cow position: chr8:46816654-46817054 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 257
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 184, 176

Conread position: 14-414
Cow position: chr8:46816738-46817138 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 261
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 111, 96

Conread position: 17-411
Cow position: chr8:45201546-45201940 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 17-414
Cow position: chr8:45201042-45201439 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 247
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 17-414
Cow position: chr8:55581182-55581579 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 252
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 291, 285

Conread position: 56-374
Cow position: chr8:46817032-46817350 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 193
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 56-405
Cow position: chr8:55581389-55581738 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 214
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 64

Conread position: 56-414
Cow position: chr8:45201333-45201691 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 230
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 56-414
Cow position: chr8:48407315-48406957 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 230
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 58-414
Cow position: chr8:45200999-45201355 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 218
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 68-414
Cow position: chr8:55580897-55581243 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 220
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 72-414
Cow position: chr8:48407635-48407293 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 219
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 55, 44

Conread position: 77-414
Cow position: chr8:48406706-48406369 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 219
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 40, 54

Conread position: 152-414
Cow position: chr8:55580897-55581159 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 73, 66

Conread position: 229-414
Cow position: chr8:55580890-55581075 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 236-410
Cow position: chr8:6958005-6957831 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 67

Show alignments to all cow chromosomes.