Cow genome map

Conread name: Ss1.1-rpliv0124_d2.5

Conread position: 1-414
Cow position:
Alignm length: 415
Alignm identity: 263
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 56, 45

Conread position: 1-414
Cow position:
Alignm length: 414
Alignm identity: 255
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 2-393
Cow position:
Alignm length: 392
Alignm identity: 244
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 2-405
Cow position:
Alignm length: 404
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-408
Cow position:
Alignm length: 408
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 379

Conread position: 2-409
Cow position:
Alignm length: 409
Alignm identity: 254
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 222, 213

Conread position: 2-413
Cow position:
Alignm length: 412
Alignm identity: 257
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 2-414
Cow position:
Alignm length: 413
Alignm identity: 250
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 2-414
Cow position:
Alignm length: 414
Alignm identity: 259
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 52, 48

Conread position: 2-414
Cow position:
Alignm length: 414
Alignm identity: 266
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 210, 199

Conread position: 2-414
Cow position:
Alignm length: 413
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-420
Cow position:
Alignm length: 421
Alignm identity: 264
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 198, 207

Conread position: 3-333
Cow position:
Alignm length: 331
Alignm identity: 212
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 3-370
Cow position:
Alignm length: 368
Alignm identity: 236
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 3-414
Cow position:
Alignm length: 414
Alignm identity: 258
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 40, 20

Conread position: 3-415
Cow position:
Alignm length: 416
Alignm identity: 247
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 102, 110

Conread position: 5-414
Cow position:
Alignm length: 410
Alignm identity: 256
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 6-414
Cow position:
Alignm length: 409
Alignm identity: 262
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 8-331
Cow position:
Alignm length: 324
Alignm identity: 195
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 8-414
Cow position:
Alignm length: 411
Alignm identity: 250
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 108, 118

Conread position: 8-414
Cow position:
Alignm length: 411
Alignm identity: 254
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 24, 15

Conread position: 8-414
Cow position:
Alignm length: 410
Alignm identity: 266
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 43

Conread position: 14-414
Cow position:
Alignm length: 401
Alignm identity: 244
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 14-414
Cow position:
Alignm length: 401
Alignm identity: 253
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 14-414
Cow position:
Alignm length: 402
Alignm identity: 250
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 41, 35

Conread position: 14-414
Cow position:
Alignm length: 402
Alignm identity: 258
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 391, 386

Conread position: 14-414
Cow position:
Alignm length: 403
Alignm identity: 257
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 184, 176

Conread position: 14-414
Cow position:
Alignm length: 405
Alignm identity: 261
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 111, 96

Conread position: 17-411
Cow position:
Alignm length: 395
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 17-414
Cow position:
Alignm length: 398
Alignm identity: 247
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 17-414
Cow position:
Alignm length: 399
Alignm identity: 252
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 291, 285

Conread position: 56-374
Cow position:
Alignm length: 319
Alignm identity: 193
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 56-405
Cow position:
Alignm length: 351
Alignm identity: 214
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 64

Conread position: 56-414
Cow position:
Alignm length: 359
Alignm identity: 230
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 56-414
Cow position:
Alignm length: 359
Alignm identity: 230
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 58-414
Cow position:
Alignm length: 357
Alignm identity: 218
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 68-414
Cow position:
Alignm length: 347
Alignm identity: 220
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 72-414
Cow position:
Alignm length: 344
Alignm identity: 219
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 55, 44

Conread position: 77-414
Cow position:
Alignm length: 340
Alignm identity: 219
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 40, 54

Conread position: 152-414
Cow position:
Alignm length: 264
Alignm identity: 187
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 73, 66

Conread position: 229-414
Cow position:
Alignm length: 186
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 236-410
Cow position:
Alignm length: 176
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 67

Show alignments to all cow chromosomes.