Cow genome map


           Conread name:
           Ss1.1-rpliv0124_d2.5
        

               Conread position:
               1-368
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               144, 152
               

               Conread position:
               2-335
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               37, 45
               

               Conread position:
               2-370
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-405
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               34, 46
               

               Conread position:
               2-414
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               262
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               119, 108
               

               Conread position:
               2-414
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               273
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               55, 43
               

               Conread position:
               2-414
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               260
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               137, 114
               

               Conread position:
               2-414
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               268
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               10, 16
               

               Conread position:
               2-414
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 94
               

               Conread position:
               8-367
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               46, 36
               

               Conread position:
               8-384
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               24, 15
               

               Conread position:
               8-397
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               46, 39
               

               Conread position:
               8-414
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               252
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               49, 42
               

               Conread position:
               8-414
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-397
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               249
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               7, 190
               

               Conread position:
               12-368
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-344
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               91, 100
               

               Conread position:
               14-360
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               192, 176
               

               Conread position:
               14-414
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 36
               

               Conread position:
               14-414
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-414
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               250
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-414
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               256
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               43, 36
               

               Conread position:
               14-414
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               43, 36
               

               Conread position:
               17-414
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               292, 286
               

               Conread position:
               19-414
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               240
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               199, 205
               

               Conread position:
               19-414
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               22, 39
               

               Conread position:
               21-414
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               9, 14
               

               Conread position:
               55-414
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               62, 80
               

               Conread position:
               55-414
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               56-411
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               85, 68
               

               Conread position:
               68-400
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               241, 234
               

               Conread position:
               68-414
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               73, 66
               

               Conread position:
               74-356
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               158-414
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.