Cow genome map


           Conread name:
           Ss1.1-rpliv0125_p15.5
        

               Conread position:
               1-466
               

               Cow position:
               chr13:39984407-39984872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 45
               

               Conread position:
               1-492
               

               Cow position:
               chr13:39983987-39984480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               295
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               44, 34
               

               Conread position:
               1-492
               

               Cow position:
               chr13:39984071-39984564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               300
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               51, 60
               

               Conread position:
               3-326
               

               Cow position:
               chr13:39984577-39984903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               39, 32
               

               Conread position:
               65-451
               

               Cow position:
               chr13:39984387-39984775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               254
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               145, 159
               

               Conread position:
               135-447
               

               Cow position:
               chr13:56292145-56291831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               80, 93
               

               Conread position:
               142-451
               

               Cow position:
               chr13:56333692-56334003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               59, 86
               
Show alignments to all cow chromosomes.