Cow genome map
| Conread name: | Ss1.1-rpliv0125_p15.5 |
| Conread position: | 1-373 |
| Cow position: | chr14:25784358-25784733 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 36, 56 |
| Conread position: | 1-413 |
| Cow position: | chr14:25860366-25860781 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 251 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 29, 54 |
| Conread position: | 1-427 |
| Cow position: | chr14:25859694-25860123 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 258 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 61, 34 |
| Conread position: | 1-428 |
| Cow position: | chr14:25836053-25836483 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 254 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 36, 54 |
| Conread position: | 1-428 |
| Cow position: | chr14:25859358-25859788 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 36, 59 |
| Conread position: | 1-442 |
| Cow position: | chr14:25876745-25877188 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 273 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 52, 34 |
| Conread position: | 1-444 |
| Cow position: | chr14:25794588-25794144 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 48, 34 |
| Conread position: | 1-446 |
| Cow position: | chr14:25784106-25784553 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 285 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 294, 429 |
| Conread position: | 1-446 |
| Cow position: | chr14:25859526-25859973 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 34, 45 |
| Conread position: | 1-446 |
| Cow position: | chr14:25859778-25860225 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 54 |
| Conread position: | 1-447 |
| Cow position: | chr14:25783938-25784385 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 294, 429 |
| Conread position: | 1-451 |
| Cow position: | chr14:25783350-25783802 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 72 |
| Conread position: | 1-451 |
| Cow position: | chr14:25783518-25783970 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 36, 58 |
| Conread position: | 1-451 |
| Cow position: | chr14:25783770-25784222 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 287 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 36, 58 |
| Conread position: | 1-451 |
| Cow position: | chr14:25784274-25784726 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 41, 67 |
| Conread position: | 1-451 |
| Cow position: | chr14:25794756-25794303 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 35, 65 |
| Conread position: | 1-451 |
| Cow position: | chr14:25795008-25794556 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 282 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 58, 47 |
| Conread position: | 1-451 |
| Cow position: | chr14:25836305-25836757 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 279 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 30, 52 |
| Conread position: | 1-451 |
| Cow position: | chr14:25836557-25837009 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 282 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 36, 54 |
| Conread position: | 1-451 |
| Cow position: | chr14:25860114-25860566 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 285 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 1-451 |
| Cow position: | chr14:25877165-25877617 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 1-491 |
| Cow position: | chr14:25795176-25794684 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 305 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 87, 54 |
| Conread position: | 2-442 |
| Cow position: | chr14:25859191-25859633 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 279 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 47, 37 |
| Conread position: | 2-447 |
| Cow position: | chr14:25795343-25794897 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 290 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 71, 33 |
| Conread position: | 3-368 |
| Cow position: | chr14:3101076-3100713 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 287, 16 |
| Conread position: | 3-447 |
| Cow position: | chr14:25836727-25837173 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 31, 46 |
| Conread position: | 12-429 |
| Cow position: | chr14:25877428-25877848 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 18, 43 |
| Conread position: | 12-456 |
| Cow position: | chr14:25876504-25876950 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 25, 48 |
| Conread position: | 52-447 |
| Cow position: | chr14:25876460-25876857 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 106, 101 |
| Conread position: | 134-428 |
| Cow position: | chr14:25835934-25836231 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 19 |
| Conread position: | 151-446 |
| Cow position: | chr14:3127782-3127485 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 50, 74 |
Show alignments to all cow chromosomes.