Cow genome map
| Conread name: | Ss1.1-rpliv0125_p15.5 |
| Conread position: | 1-365 |
| Cow position: | chr17:22499305-22498939 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 36, 72 |
| Conread position: | 1-371 |
| Cow position: | chr17:22452207-22451834 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 60, 42 |
| Conread position: | 1-394 |
| Cow position: | chr17:22589592-22589196 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 255 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 44, 60 |
| Conread position: | 1-428 |
| Cow position: | chr17:22498969-22498539 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 46, 72 |
| Conread position: | 1-444 |
| Cow position: | chr17:22473508-22473954 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 45 |
| Conread position: | 1-447 |
| Cow position: | chr17:22552678-22552230 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 268 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 44, 72 |
| Conread position: | 1-451 |
| Cow position: | chr17:22452375-22451923 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 51, 65 |
| Conread position: | 1-451 |
| Cow position: | chr17:22499053-22498601 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 41, 59 |
| Conread position: | 1-451 |
| Cow position: | chr17:22552258-22551806 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 282 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 59, 34 |
| Conread position: | 1-451 |
| Cow position: | chr17:22552427-22551974 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 7, 54 |
| Conread position: | 1-456 |
| Cow position: | chr17:22552174-22551717 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 47, 36 |
| Conread position: | 1-457 |
| Cow position: | chr17:22589928-22589470 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 44, 60 |
| Conread position: | 2-447 |
| Cow position: | chr17:22499388-22498942 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 35, 64 |
| Conread position: | 2-447 |
| Cow position: | chr17:22590179-22589732 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 58, 33 |
| Conread position: | 7-446 |
| Cow position: | chr17:22473262-22473703 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 54 |
| Conread position: | 43-451 |
| Cow position: | chr17:22590305-22589896 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 261 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 73, 15 |
| Conread position: | 65-368 |
| Cow position: | chr17:22551858-22551552 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 59, 79 |
| Conread position: | 85-451 |
| Cow position: | chr17:22499389-22499021 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 218, 345 |
Show alignments to all cow chromosomes.