Cow genome map
| Conread name: | Ss1.1-rpliv0125_p15.5 |
| Conread position: | 1-286 |
| Cow position: | chr19:23614783-23615068 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 34, 45 |
| Conread position: | 1-289 |
| Cow position: | chr19:23650149-23650437 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 36, 72 |
| Conread position: | 1-408 |
| Cow position: | chr19:23597288-23597698 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 36, 65 |
| Conread position: | 1-415 |
| Cow position: | chr19:43570049-43569634 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 255 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 1-418 |
| Cow position: | chr19:20635458-20635038 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 271 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 44, 34 |
| Conread position: | 1-425 |
| Cow position: | chr19:20678378-20678802 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 274 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 44, 60 |
| Conread position: | 1-442 |
| Cow position: | chr19:14960384-14959943 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 299 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 44, 34 |
| Conread position: | 1-446 |
| Cow position: | chr19:14940331-14940778 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 284 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 36, 58 |
| Conread position: | 1-446 |
| Cow position: | chr19:14940499-14940946 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 38, 66 |
| Conread position: | 1-447 |
| Cow position: | chr19:14940079-14940527 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 123, 144 |
| Conread position: | 1-447 |
| Cow position: | chr19:20635542-20635095 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 36, 59 |
| Conread position: | 1-447 |
| Cow position: | chr19:23613775-23614222 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 65 |
| Conread position: | 1-447 |
| Cow position: | chr19:23614279-23614727 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 282 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 36, 65 |
| Conread position: | 1-447 |
| Cow position: | chr19:43570217-43569769 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 292 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 42, 34 |
| Conread position: | 1-451 |
| Cow position: | chr19:14940583-14941035 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 44, 60 |
| Conread position: | 1-451 |
| Cow position: | chr19:14960300-14959850 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 38, 65 |
| Conread position: | 1-451 |
| Cow position: | chr19:20635626-20635174 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 292 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 44, 60 |
| Conread position: | 1-451 |
| Cow position: | chr19:20677454-20677906 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 287 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 121, 136 |
| Conread position: | 1-451 |
| Cow position: | chr19:20677958-20678410 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 59 |
| Conread position: | 1-451 |
| Cow position: | chr19:23613355-23613807 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 34 |
| Conread position: | 1-451 |
| Cow position: | chr19:23614363-23614815 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 283 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 58, 42 |
| Conread position: | 1-451 |
| Cow position: | chr19:23614615-23615067 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 293 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 69, 34 |
| Conread position: | 1-452 |
| Cow position: | chr19:23613523-23613976 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 299 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 34, 45 |
| Conread position: | 1-453 |
| Cow position: | chr19:23649729-23650183 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 293 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 29, 71 |
| Conread position: | 3-379 |
| Cow position: | chr19:14940669-14941048 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 42, 58 |
| Conread position: | 3-438 |
| Cow position: | chr19:23614701-23615136 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 282 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 34, 63 |
| Conread position: | 3-445 |
| Cow position: | chr19:23613945-23614389 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 58 |
| Conread position: | 3-446 |
| Cow position: | chr19:23597206-23597651 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 32, 43 |
| Conread position: | 3-447 |
| Cow position: | chr19:23613693-23614139 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 36 |
| Conread position: | 3-451 |
| Cow position: | chr19:20677708-20678158 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 56 |
| Conread position: | 3-451 |
| Cow position: | chr19:23649563-23650013 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 57 |
| Conread position: | 4-425 |
| Cow position: | chr19:23649984-23650408 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 264 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 33, 46 |
| Conread position: | 5-451 |
| Cow position: | chr19:23597040-23597488 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 55 |
| Conread position: | 6-492 |
| Cow position: | chr19:20678215-20678703 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 55 |
| Conread position: | 12-451 |
| Cow position: | chr19:14940006-14940447 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 277 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 25, 44 |
| Conread position: | 21-451 |
| Cow position: | chr19:20677309-20677738 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 13, 42 |
| Conread position: | 46-447 |
| Cow position: | chr19:23614493-23614895 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 244, 19 |
| Conread position: | 58-447 |
| Cow position: | chr19:23649453-23649841 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 232, 12 |
| Conread position: | 65-446 |
| Cow position: | chr19:43570237-43569854 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 205, 209 |
| Conread position: | 72-452 |
| Cow position: | chr19:14948470-14948091 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 128, 18 |
| Conread position: | 87-451 |
| Cow position: | chr19:14939997-14940363 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 245 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 29, 68 |
| Conread position: | 99-451 |
| Cow position: | chr19:14959305-14958957 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 130, 111 |
| Conread position: | 149-492 |
| Cow position: | chr19:43570395-43570060 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 69, 57 |
| Conread position: | 228-447 |
| Cow position: | chr19:14960409-14960189 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 68, 202 |
| Conread position: | 231-447 |
| Cow position: | chr19:23613332-23613550 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 159 |
Show alignments to all cow chromosomes.