Cow genome map


           Conread name:
           Ss1.1-rpliv0125_p15.5
        

               Conread position:
               1-369
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               34, 45
               

               Conread position:
               1-380
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               36, 48
               

               Conread position:
               1-421
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               288
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               38, 46
               

               Conread position:
               1-421
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               283
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               36, 46
               

               Conread position:
               1-446
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               281
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               53, 60
               

               Conread position:
               1-447
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               285
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               58, 53
               

               Conread position:
               1-447
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               272
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               291, 387
               

               Conread position:
               1-447
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               285
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               295, 429
               

               Conread position:
               1-447
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               60, 53
               

               Conread position:
               1-447
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               295
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               223, 203
               

               Conread position:
               1-447
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               292
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               36, 50
               

               Conread position:
               1-451
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               293
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               44, 59
               

               Conread position:
               1-451
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               280
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               46, 60
               

               Conread position:
               1-451
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 60
               

               Conread position:
               1-451
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               275
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               36, 60
               

               Conread position:
               1-451
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               219, 228
               

               Conread position:
               1-451
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               280
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               49, 31
               

               Conread position:
               1-454
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               295
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               291
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               46, 60
               

               Conread position:
               1-461
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               288
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               36, 60
               

               Conread position:
               2-408
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               259
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               33, 47
               

               Conread position:
               2-451
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 135
               

               Conread position:
               3-368
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               136, 151
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               128, 154
               

               Conread position:
               3-420
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               44, 69
               

               Conread position:
               3-428
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               266
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               58, 51
               

               Conread position:
               3-440
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               276
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               42, 58
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               285
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               42, 55
               

               Conread position:
               3-447
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 151
               

               Conread position:
               3-451
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               281
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               293, 378
               

               Conread position:
               3-452
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 122
               

               Conread position:
               3-453
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               293
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               34, 70
               

               Conread position:
               3-458
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               292
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               34, 44
               

               Conread position:
               3-459
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               300
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               34, 44
               

               Conread position:
               3-459
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               58, 51
               

               Conread position:
               3-461
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               287
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               271, 266
               

               Conread position:
               3-492
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 34
               

               Conread position:
               4-447
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               210, 202
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 51
               

               Conread position:
               6-442
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               139, 118
               

               Conread position:
               6-447
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               277
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               31, 44
               

               Conread position:
               10-422
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               113, 126
               

               Conread position:
               11-452
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               34, 46
               

               Conread position:
               52-451
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               240
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               244, 13
               

               Conread position:
               60-447
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               243
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               236, 368
               

               Conread position:
               72-451
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               243
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               51, 67
               

               Conread position:
               85-442
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               135, 143
               

               Conread position:
               86-451
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               46, 28
               

               Conread position:
               90-442
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               230
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               54, 27
               

               Conread position:
               90-456
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               202, 340
               

               Conread position:
               105-452
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               228
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               185, 262
               

               Conread position:
               113-371
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               21, 35
               

               Conread position:
               143-461
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               149, 287
               

               Conread position:
               166-447
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               126, 264
               
Show alignments to all cow chromosomes.