Cow genome map
| Conread name: | Ss1.1-rpliv0125_p15.5 |
| Conread position: | 1-287 |
| Cow position: | chr28:7758008-7758294 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 60 |
| Conread position: | 1-419 |
| Cow position: | chr28:9253191-9253612 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 32, 56 |
| Conread position: | 1-420 |
| Cow position: | chr28:7757672-7758094 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 32, 58 |
| Conread position: | 1-447 |
| Cow position: | chr28:7757756-7758203 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 35, 65 |
| Conread position: | 1-451 |
| Cow position: | chr28:9253107-9253559 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 294 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 36, 58 |
| Conread position: | 1-451 |
| Cow position: | chr28:9298656-9299103 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 280 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 46, 9 |
| Conread position: | 1-458 |
| Cow position: | chr28:9253023-9253482 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 290 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 32, 56 |
| Conread position: | 2-369 |
| Cow position: | chr28:9290257-9290625 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 43, 33 |
| Conread position: | 3-362 |
| Cow position: | chr28:7758414-7758776 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 34, 68 |
| Conread position: | 5-447 |
| Cow position: | chr28:7757508-7757952 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 31, 61 |
| Conread position: | 6-355 |
| Cow position: | chr28:9290345-9290695 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 39, 32 |
| Conread position: | 18-433 |
| Cow position: | chr28:7810528-7810945 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 262 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 27, 48 |
| Conread position: | 65-447 |
| Cow position: | chr28:11334153-11333769 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 129, 164 |
| Conread position: | 90-369 |
| Cow position: | chr28:34673364-34673646 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 28, 20 |
| Conread position: | 91-456 |
| Cow position: | chr28:7758334-7758701 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 201, 339 |
| Conread position: | 143-447 |
| Cow position: | chr28:7757478-7757784 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 147, 239 |
| Conread position: | 187-428 |
| Cow position: | chr28:7810286-7810530 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 21 |
Show alignments to all cow chromosomes.