Cow genome map


           Conread name:
           Ss1.1-rpliv0125_p15.5
        

               Conread position:
               1-425
               

               Cow position:
               chr6:49340996-49341423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               272
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               60, 56
               

               Conread position:
               1-447
               

               Cow position:
               chr6:49395883-49396325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               280
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               207, 218
               

               Conread position:
               3-451
               

               Cow position:
               chr6:49340662-49341112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               278
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               34, 64
               

               Conread position:
               3-454
               

               Cow position:
               chr6:49340410-49340862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               48, 63
               

               Conread position:
               135-446
               

               Cow position:
               chr6:49396263-49396576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               23, 18
               

               Conread position:
               140-418
               

               Cow position:
               chr6:49340381-49340660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               150, 12
               

               Conread position:
               234-451
               

               Cow position:
               chr6:49340389-49340608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               75, 195
               
Show alignments to all cow chromosomes.