Cow genome map
| Conread name: | Ss1.1-rpliv0125_p15.5 |
| Conread position: | 1-367 |
| Cow position: | chrX:12627693-12628062 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 73, 65 |
| Conread position: | 1-428 |
| Cow position: | chrX:29045088-29044658 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 44, 66 |
| Conread position: | 1-440 |
| Cow position: | chrX:25310146-25310586 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 280 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 49, 37 |
| Conread position: | 1-447 |
| Cow position: | chrX:25325247-25324799 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 51, 42 |
| Conread position: | 1-447 |
| Cow position: | chrX:25325583-25325136 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 297 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 39, 48 |
| Conread position: | 1-451 |
| Cow position: | chrX:12627443-12627893 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 34 |
| Conread position: | 1-451 |
| Cow position: | chrX:25324743-25324291 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 277 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 72, 34 |
| Conread position: | 1-451 |
| Cow position: | chrX:25324911-25324459 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 288 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 44, 65 |
| Conread position: | 1-451 |
| Cow position: | chrX:25325163-25324711 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 52, 32 |
| Conread position: | 2-451 |
| Cow position: | chrX:25309979-25310430 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 290 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 58, 33 |
| Conread position: | 3-447 |
| Cow position: | chrX:25309896-25310342 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 42, 63 |
| Conread position: | 3-447 |
| Cow position: | chrX:25324993-25324548 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 288 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 58, 32 |
| Conread position: | 4-221 |
| Cow position: | chrX:12627864-12628081 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 5-447 |
| Cow position: | chrX:25309730-25310174 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 279 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 6-447 |
| Cow position: | chrX:29045251-29044808 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 278 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 39, 54 |
| Conread position: | 8-447 |
| Cow position: | chrX:29045333-29044892 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 60, 31 |
| Conread position: | 73-447 |
| Cow position: | chrX:25325595-25325220 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 63, 44 |
| Conread position: | 90-446 |
| Cow position: | chrX:29045734-29045376 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 138, 117 |
| Conread position: | 174-474 |
| Cow position: | chrX:12627280-12627582 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 109, 213 |
Show alignments to all cow chromosomes.