Cow genome map


           Conread name:
           Ss1.1-rptbr0106_g8.5
        

               Conread position:
               340-466
               

               Cow position:
               chr2:14459078-14459205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               80, 42
               

               Conread position:
               468-959
               

               Cow position:
               chr2:14459157-14459643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               348, 275
               

               Conread position:
               731-956
               

               Cow position:
               chr2:39483288-39483046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               18, 76
               

               Conread position:
               754-957
               

               Cow position:
               chr2:26677713-26677925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               64, 15
               

               Conread position:
               761-947
               

               Cow position:
               chr2:39541244-39541443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               766-947
               

               Cow position:
               chr2:21727400-21727587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               39, 98
               

               Conread position:
               769-951
               

               Cow position:
               chr2:37600567-37600761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               49, 0
               
Show alignments to all cow chromosomes.